Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm43563-201ENSMUST00000196761 198 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm44338-201ENSMUST00000198614 110 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm9377-201ENSMUST00000207227 623 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm5175-202ENSMUST00000219699 529 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm24449-201ENSMUST00000083985 106 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Snora2b-201ENSMUST00000084005 137 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22373-201ENSMUST00000104584 89 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25391-201ENSMUST00000157342 134 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23713-201ENSMUST00000157353 70 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23644-201ENSMUST00000157856 77 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22615-201ENSMUST00000158102 70 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22840-201ENSMUST00000158444 136 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm45162-201ENSMUST00000209013 618 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm45543-201ENSMUST00000209327 88 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Gm35405-201ENSMUST00000218754 400 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Snora7a-201ENSMUST00000082629 140 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Sh3rf1Q69ZI1 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm24276-201ENSMUST00000102181 110 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23256-201ENSMUST00000102235 110 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm26140-201ENSMUST00000103807 110 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23320-201ENSMUST00000104462 127 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Mir1298-201ENSMUST00000116681 98 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm15268-201ENSMUST00000118845 352 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm15183-201ENSMUST00000118933 348 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm8840-201ENSMUST00000122454 386 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm26005-201ENSMUST00000158802 134 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm27445-201ENSMUST00000184484 72 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm27753-201ENSMUST00000184742 203 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm44052-201ENSMUST00000203382 396 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22245-201ENSMUST00000082479 103 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25634-201ENSMUST00000082667 105 ntBASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Sh3rf1Q69ZI1 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23013-201ENSMUST00000104146 106 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm43602-201ENSMUST00000196772 300 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23925-201ENSMUST00000082471 132 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Snora19-201ENSMUST00000082962 132 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23658-201ENSMUST00000083233 132 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25136-201ENSMUST00000083253 115 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23462-201ENSMUST00000083264 104 ntBASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25377-201ENSMUST00000104334 129 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24982-201ENSMUST00000104456 132 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23492-201ENSMUST00000116837 115 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24314-201ENSMUST00000158274 123 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24053-201ENSMUST00000158620 105 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm27392-201ENSMUST00000185041 101 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23518-201ENSMUST00000082835 153 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sh3rf1Q69ZI1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms