Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim28Q62318 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim28Q62318 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim28Q62318 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm26500-201ENSMUST00000101867 106 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm24121-201ENSMUST00000102029 106 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm24068-201ENSMUST00000104513 132 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Mir466k-201ENSMUST00000116774 122 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm14657-201ENSMUST00000117461 302 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim28Q62318 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim28Q62318 Gm22328-201ENSMUST00000158074 112 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm24348-201ENSMUST00000158710 130 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm24681-201ENSMUST00000158760 107 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm23415-201ENSMUST00000175519 83 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm5329-201ENSMUST00000186898 463 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm28453-203ENSMUST00000187041 189 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm18956-201ENSMUST00000192857 480 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm44223-201ENSMUST00000204854 114 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm44446-201ENSMUST00000204864 255 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm45101-201ENSMUST00000208327 232 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm10025-201ENSMUST00000079568 372 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Gm23738-201ENSMUST00000082828 171 ntBASIC3.67□□□□□ -1.82
Trim28Q62318 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trim28Q62318 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim28Q62318 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim28Q62318 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim28Q62318 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm23577-201ENSMUST00000103950 110 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm13714-201ENSMUST00000117313 221 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm7123-201ENSMUST00000117647 213 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm16242-201ENSMUST00000117741 334 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm12417-201ENSMUST00000119153 403 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm25270-201ENSMUST00000122606 138 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm25051-201ENSMUST00000158602 249 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm17052-201ENSMUST00000165496 289 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm29574-201ENSMUST00000186226 696 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm37624-201ENSMUST00000193751 219 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm9402-201ENSMUST00000196849 388 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm42578-201ENSMUST00000199960 194 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm43239-201ENSMUST00000200131 201 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim28Q62318 Gm22828-201ENSMUST00000083768 107 ntBASIC3.66□□□□□ -1.82
Trim28Q62318 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim28Q62318 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim28Q62318 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim28Q62318 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.65□□□□□ -1.82
Trim28Q62318 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.65□□□□□ -1.82
Trim28Q62318 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Trim28Q62318 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim28Q62318 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Trim28Q62318 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim28Q62318 Gm24423-201ENSMUST00000101982 106 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm13457-201ENSMUST00000117885 267 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm25914-201ENSMUST00000157618 153 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm25834-201ENSMUST00000158916 101 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim28Q62318 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm23850-201ENSMUST00000083830 169 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.65□□□□□ -1.83
Trim28Q62318 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim28Q62318 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trim28Q62318 Gm25223-201ENSMUST00000158200 110 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm23268-201ENSMUST00000175494 78 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Gm27851-201ENSMUST00000183529 63 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Mir6917-201ENSMUST00000184111 61 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm36946-201ENSMUST00000192706 435 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Gm7422-201ENSMUST00000220115 640 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trim28Q62318 Gm24148-201ENSMUST00000082762 80 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm22685-201ENSMUST00000082848 106 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm26055-201ENSMUST00000083038 107 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.64□□□□□ -1.83
Trim28Q62318 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.64□□□□□ -1.83
Trim28Q62318 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim28Q62318 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim28Q62318 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Trim28Q62318 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.63□□□□□ -1.83
Trim28Q62318 Gm23990-201ENSMUST00000117031 117 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 417 ms