Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm43780-201ENSMUST00000196510 3600 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm24132-201ENSMUST00000104745 91 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm12304-201ENSMUST00000120312 385 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm26476-201ENSMUST00000122618 313 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm22382-201ENSMUST00000158185 130 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm18751-201ENSMUST00000185777 2013 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm43217-201ENSMUST00000199513 367 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm20144-201ENSMUST00000203031 165 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Gm23925-201ENSMUST00000082471 132 ntBASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Scaf1Q5U4C3 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm24892-201ENSMUST00000122747 104 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm23602-201ENSMUST00000157258 132 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm25977-201ENSMUST00000158697 85 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm23775-201ENSMUST00000158991 249 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm44355-201ENSMUST00000200417 104 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm43155-201ENSMUST00000202661 494 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Gm10161-201ENSMUST00000091506 204 ntBASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Scaf1Q5U4C3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Snord14c-201ENSMUST00000101927 86 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm14073-201ENSMUST00000117344 381 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm24053-201ENSMUST00000158620 105 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm22890-201ENSMUST00000158642 144 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm25835-201ENSMUST00000158917 144 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm20693-201ENSMUST00000177431 211 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 AF357341-201ENSMUST00000083088 75 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.91□□□□□ -1.62
Scaf1Q5U4C3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Scaf1Q5U4C3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scaf1Q5U4C3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Gm23492-201ENSMUST00000116837 115 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Gm12351-201ENSMUST00000118727 292 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Gm23168-201ENSMUST00000157156 143 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Gm37624-201ENSMUST00000193751 219 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 AC173345.2-201ENSMUST00000222795 153 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 AC183092.1-201ENSMUST00000224301 153 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Gm25789-201ENSMUST00000083294 76 ntBASIC4.9□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm16032-201ENSMUST00000118534 168 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm14687-201ENSMUST00000120206 363 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm16005-201ENSMUST00000120515 269 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm27903-201ENSMUST00000175482 126 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm23571-201ENSMUST00000180073 127 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Mir6399-201ENSMUST00000184050 84 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Gm43746-201ENSMUST00000200028 317 ntBASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scaf1Q5U4C3 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm28010-201ENSMUST00000179485 126 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm43193-201ENSMUST00000197732 441 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm43651-201ENSMUST00000199796 439 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm44563-201ENSMUST00000207958 178 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm45778-201ENSMUST00000211959 153 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm21007-201ENSMUST00000221024 326 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 AC134596.2-201ENSMUST00000222158 171 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.88□□□□□ -1.63
Scaf1Q5U4C3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Scaf1Q5U4C3 Gm16327-201ENSMUST00000137146 228 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms