Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mir28b-201ENSMUST00000175399 80 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm42509-201ENSMUST00000197390 781 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm18598-201ENSMUST00000207724 597 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22062-201ENSMUST00000082563 107 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24258-201ENSMUST00000083739 133 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25008-201ENSMUST00000083809 81 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22496-201ENSMUST00000104493 88 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24588-201ENSMUST00000116696 83 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm12449-201ENSMUST00000117572 234 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm15167-201ENSMUST00000121997 187 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23419-201ENSMUST00000175523 84 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24417-201ENSMUST00000178123 79 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24653-201ENSMUST00000178541 79 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25934-201ENSMUST00000178642 79 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25175-201ENSMUST00000178712 79 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26189-201ENSMUST00000179879 107 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm42570-201ENSMUST00000195937 292 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm44300-201ENSMUST00000196792 121 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm45247-201ENSMUST00000210757 309 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm45878-201ENSMUST00000211839 241 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25038-201ENSMUST00000082928 130 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Olfr575-201ENSMUST00000084812 957 ntBASIC0.43□□□□□ -2.34
Trav6d-4Q5R1I0 Mir544-201ENSMUST00000103813 78 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23321-201ENSMUST00000104465 126 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26348-201ENSMUST00000157528 240 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22163-201ENSMUST00000158408 135 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm21758-201ENSMUST00000179336 819 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm29647-201ENSMUST00000188795 666 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm20832-201ENSMUST00000189076 665 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm28241-201ENSMUST00000190916 235 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm28504-201ENSMUST00000190977 666 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm35843-201ENSMUST00000193716 666 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm37743-201ENSMUST00000194645 376 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm36728-201ENSMUST00000195782 665 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm18410-201ENSMUST00000207199 577 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26328-201ENSMUST00000082821 107 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Snord1a-201ENSMUST00000083160 74 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25794-201ENSMUST00000083286 107 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Snora34-201ENSMUST00000083402 138 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26166-201ENSMUST00000083788 107 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.42□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24282-201ENSMUST00000104232 66 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm12304-201ENSMUST00000120312 385 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25115-201ENSMUST00000157187 140 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25933-201ENSMUST00000178943 108 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm44324-201ENSMUST00000198517 135 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm37096-201ENSMUST00000192317 2058 ntBASIC0.41□□□□□ -2.34
Trav6d-4Q5R1I0 Gm12370-201ENSMUST00000117809 604 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14594-201ENSMUST00000118052 537 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14590-201ENSMUST00000118934 537 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm12044-201ENSMUST00000120335 213 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14972-201ENSMUST00000121780 364 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm24385-201ENSMUST00000122694 350 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm22452-201ENSMUST00000122804 104 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm24747-201ENSMUST00000157835 87 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm22945-201ENSMUST00000158557 157 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14596-201ENSMUST00000180268 537 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14595-201ENSMUST00000180335 537 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm42647-201ENSMUST00000195939 459 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm43245-201ENSMUST00000197603 468 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm17990-201ENSMUST00000211728 553 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm18160-201ENSMUST00000214279 827 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm25578-201ENSMUST00000083406 104 ntBASIC0.4□□□□□ -2.35
Trav6d-4Q5R1I0 Gm23836-201ENSMUST00000104434 129 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm15878-201ENSMUST00000127561 306 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm26414-201ENSMUST00000157674 269 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm27396-201ENSMUST00000157708 58 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm22389-201ENSMUST00000158193 301 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm16404-201ENSMUST00000177739 468 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm7958-201ENSMUST00000178255 468 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm7950-201ENSMUST00000179633 468 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14598-201ENSMUST00000180109 468 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm14625-201ENSMUST00000180231 468 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm43583-201ENSMUST00000199235 303 ntBASIC0.39□□□□□ -2.35
Trav6d-4Q5R1I0 Gm44254-201ENSMUST00000204184 322 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms