Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm24348-201ENSMUST00000158710 130 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Mir28b-201ENSMUST00000175399 80 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Zfp950-206ENSMUST00000178819 171 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Gm22229-201ENSMUST00000082987 108 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.46□□□□□ -2.18
Upf3bQ3ULL6 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Mir223-201ENSMUST00000102112 110 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm24079-201ENSMUST00000104352 132 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm13409-201ENSMUST00000122072 546 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm24892-201ENSMUST00000122747 104 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm24910-201ENSMUST00000157289 272 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm24885-201ENSMUST00000158783 270 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm28438-201ENSMUST00000188299 345 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm23462-201ENSMUST00000083264 104 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.45□□□□□ -2.18
Upf3bQ3ULL6 Gm14624-201ENSMUST00000117746 192 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm20477-201ENSMUST00000174028 280 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm24518-201ENSMUST00000180275 94 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm29550-201ENSMUST00000185543 285 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm28917-201ENSMUST00000187294 237 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm28766-201ENSMUST00000191086 234 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm37727-201ENSMUST00000191637 819 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.44□□□□□ -2.18
Upf3bQ3ULL6 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm7916-201ENSMUST00000120325 456 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm18357-201ENSMUST00000188184 580 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm28474-201ENSMUST00000188501 315 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm28151-201ENSMUST00000189404 951 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm18971-201ENSMUST00000197240 374 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm2829-201ENSMUST00000213121 499 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm26228-201ENSMUST00000082512 107 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm25080-201ENSMUST00000082526 107 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Gm25518-201ENSMUST00000083864 107 ntBASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Upf3bQ3ULL6 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm22831-201ENSMUST00000102473 109 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm15010-201ENSMUST00000117153 407 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm14007-201ENSMUST00000118288 210 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm25162-201ENSMUST00000158906 159 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm21737-201ENSMUST00000178112 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm23269-201ENSMUST00000178701 107 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm21729-201ENSMUST00000180058 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm21853-201ENSMUST00000180071 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm20901-201ENSMUST00000180177 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm29073-201ENSMUST00000185563 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm29495-201ENSMUST00000189319 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm28090-201ENSMUST00000189458 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm21647-201ENSMUST00000189755 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm29165-201ENSMUST00000190655 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm19123-201ENSMUST00000190716 651 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm29211-201ENSMUST00000191470 664 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm36891-201ENSMUST00000191995 655 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm43723-201ENSMUST00000196886 189 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Mir3961-201ENSMUST00000198795 59 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Ear14-201ENSMUST00000049559 468 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Gm23377-201ENSMUST00000082943 126 ntBASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upf3bQ3ULL6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm22591-201ENSMUST00000104243 106 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm15266-201ENSMUST00000119635 255 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm12372-201ENSMUST00000121654 768 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm14713-201ENSMUST00000122362 686 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm23111-201ENSMUST00000122652 105 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm27659-201ENSMUST00000183472 98 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm37438-201ENSMUST00000192813 393 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm44910-201ENSMUST00000208451 396 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm29817-201ENSMUST00000210098 172 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.41□□□□□ -2.18
Upf3bQ3ULL6 Gm24490-201ENSMUST00000083803 98 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms