Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col28a1Q2UY11 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.84□□□□□ -1.96
Col28a1Q2UY11 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.84□□□□□ -1.96
Col28a1Q2UY11 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Col28a1Q2UY11 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm14448-201ENSMUST00000116383 210 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm14846-201ENSMUST00000121868 216 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm12071-201ENSMUST00000121968 469 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm26479-201ENSMUST00000122620 106 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Trav20-201ENSMUST00000142754 347 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm22322-201ENSMUST00000157151 111 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm25054-201ENSMUST00000157370 97 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm26412-201ENSMUST00000157666 55 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm24736-201ENSMUST00000158862 130 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm25121-201ENSMUST00000179846 79 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm43250-201ENSMUST00000196536 273 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Mir3535-201ENSMUST00000197651 147 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.83□□□□□ -1.96
Col28a1Q2UY11 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm25411-201ENSMUST00000083760 151 ntBASIC2.83□□□□□ -1.96
Col28a1Q2UY11 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm24423-201ENSMUST00000101982 106 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm22939-201ENSMUST00000103958 131 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm14537-201ENSMUST00000117464 599 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm24839-201ENSMUST00000122602 107 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm23752-201ENSMUST00000157584 115 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm24005-201ENSMUST00000158459 296 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm25654-201ENSMUST00000158467 88 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm26215-201ENSMUST00000158584 139 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm27527-201ENSMUST00000183903 99 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Mir8106-201ENSMUST00000184520 139 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm29657-201ENSMUST00000189807 342 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm37763-201ENSMUST00000193445 120 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Gm43746-201ENSMUST00000200028 317 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col28a1Q2UY11 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm11572-201ENSMUST00000119164 120 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm13729-201ENSMUST00000120328 406 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm23184-201ENSMUST00000122594 131 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm24787-201ENSMUST00000157380 123 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm22611-201ENSMUST00000158288 150 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Mir3092-201ENSMUST00000174954 96 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm23355-201ENSMUST00000177614 107 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm23148-201ENSMUST00000180367 107 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Mir6405-201ENSMUST00000184584 124 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Mir7050-201ENSMUST00000184636 60 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm37713-201ENSMUST00000191746 198 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm37007-201ENSMUST00000194234 319 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm6615-201ENSMUST00000199426 631 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm44030-201ENSMUST00000204865 432 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm45002-201ENSMUST00000208045 120 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm26457-201ENSMUST00000082678 78 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Gm22685-201ENSMUST00000082848 106 ntBASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Col28a1Q2UY11 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Mir1195-201ENSMUST00000116818 98 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm25664-201ENSMUST00000157697 107 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm23895-201ENSMUST00000158108 160 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm23409-201ENSMUST00000158516 237 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm26287-201ENSMUST00000158887 81 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm16326-201ENSMUST00000162843 414 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm23415-201ENSMUST00000175519 83 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms