Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm26476-201ENSMUST00000122618 313 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm22537-201ENSMUST00000158172 199 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm44657-201ENSMUST00000208568 450 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm24966-201ENSMUST00000082443 79 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm23850-201ENSMUST00000083830 169 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col6a1Q04857 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col6a1Q04857 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col6a1Q04857 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm23957-201ENSMUST00000157209 90 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm25716-201ENSMUST00000158628 104 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col6a1Q04857 Mir6715-201ENSMUST00000184990 57 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Trbv6-201ENSMUST00000193743 276 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm43220-201ENSMUST00000199299 282 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Mir721-201ENSMUST00000200230 88 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm44594-201ENSMUST00000208982 407 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm24948-201ENSMUST00000082866 207 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm26495-201ENSMUST00000083152 137 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Mir384-201ENSMUST00000083565 88 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm26166-201ENSMUST00000083788 107 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Col6a1Q04857 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col6a1Q04857 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col6a1Q04857 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.95□□□□□ -1.78
Col6a1Q04857 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col6a1Q04857 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col6a1Q04857 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col6a1Q04857 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm23697-201ENSMUST00000103897 110 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm26387-201ENSMUST00000104238 132 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm22516-201ENSMUST00000158266 124 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm22606-201ENSMUST00000158290 103 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col6a1Q04857 Mir6916-201ENSMUST00000184514 63 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm37923-201ENSMUST00000191624 161 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm9370-201ENSMUST00000222787 609 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Gm9174-201ENSMUST00000078149 255 ntBASIC3.94□□□□□ -1.78
Col6a1Q04857 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col6a1Q04857 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a1Q04857 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a1Q04857 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a1Q04857 Mdga2-203ENSMUST00000113942 423 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm26020-201ENSMUST00000122729 183 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm25391-201ENSMUST00000157342 134 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm22215-201ENSMUST00000157558 96 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm25494-201ENSMUST00000158143 100 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm20693-201ENSMUST00000177431 211 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.93□□□□□ -1.78
Col6a1Q04857 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm43746-201ENSMUST00000200028 317 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm24148-201ENSMUST00000082762 80 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm25930-201ENSMUST00000082785 107 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col6a1Q04857 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.93□□□□□ -1.78
Col6a1Q04857 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Col6a1Q04857 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col6a1Q04857 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a1Q04857 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Col6a1Q04857 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a1Q04857 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm13432-201ENSMUST00000118861 241 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm25985-201ENSMUST00000122677 107 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm24726-201ENSMUST00000158232 121 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm22521-201ENSMUST00000158272 134 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm29574-201ENSMUST00000186226 696 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm37693-201ENSMUST00000194562 234 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm44470-201ENSMUST00000203913 142 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm22620-201ENSMUST00000082700 133 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a1Q04857 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.92□□□□□ -1.78
Col6a1Q04857 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a1Q04857 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm12304-201ENSMUST00000120312 385 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Mir1942-201ENSMUST00000157274 63 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm24015-201ENSMUST00000157725 232 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms