Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm12393-201ENSMUST00000117084 848 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm12806-201ENSMUST00000119384 268 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm22038-201ENSMUST00000157277 242 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm23641-201ENSMUST00000157857 101 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm22315-201ENSMUST00000158010 143 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm25413-201ENSMUST00000158544 312 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Mir3968-201ENSMUST00000175355 100 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm28825-201ENSMUST00000186233 238 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Nkx3-1P97436 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Nkx3-1P97436 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm44962-201ENSMUST00000206460 279 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Nkx3-1P97436 Mir10a-201ENSMUST00000083585 110 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 BC022960-201ENSMUST00000119987 1815 ntBASIC1.23□□□□□ -2.21
Nkx3-1P97436 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Nkx3-1P97436 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
Nkx3-1P97436 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Mir343-201ENSMUST00000102360 75 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm24582-201ENSMUST00000103967 103 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm13457-201ENSMUST00000117885 267 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm22963-201ENSMUST00000157960 91 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm22527-201ENSMUST00000158816 106 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm24518-201ENSMUST00000180275 94 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Mir496b-201ENSMUST00000184935 113 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Mir3068-202ENSMUST00000197755 79 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm43510-201ENSMUST00000197922 353 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm25475-201ENSMUST00000082825 180 ntBASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.22□□□□□ -2.21
Nkx3-1P97436 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Mir743b-201ENSMUST00000104751 77 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm12646-201ENSMUST00000119144 238 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm14638-201ENSMUST00000121338 216 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm23000-201ENSMUST00000157083 139 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Mir6240-201ENSMUST00000184281 117 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm27490-201ENSMUST00000184754 128 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm44384-201ENSMUST00000200208 114 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm44870-201ENSMUST00000207291 357 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm17990-201ENSMUST00000211728 553 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm16976-205ENSMUST00000227324 226 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm22620-201ENSMUST00000082700 133 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm26328-201ENSMUST00000082821 107 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Gm25794-201ENSMUST00000083286 107 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Nkx3-1P97436 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.21□□□□□ -2.22
Nkx3-1P97436 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Nkx3-1P97436 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm23202-201ENSMUST00000104376 129 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm15211-201ENSMUST00000118932 528 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm24895-201ENSMUST00000122742 74 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm23981-201ENSMUST00000157136 106 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Snord11-201ENSMUST00000158468 84 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm22668-201ENSMUST00000158716 260 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm20543-201ENSMUST00000174200 726 ntBASIC1.2□□□□□ -2.22
Nkx3-1P97436 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Nkx3-1P97436 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms