Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm25707-201ENSMUST00000175120 96 ntBASIC3.8□□□□□ -1.8
Sox1P53783 Gm27271-201ENSMUST00000183509 170 ntBASIC3.8□□□□□ -1.8
Sox1P53783 Gm29167-201ENSMUST00000190024 377 ntBASIC3.8□□□□□ -1.8
Sox1P53783 Trbv7-201ENSMUST00000193339 402 ntBASIC3.8□□□□□ -1.8
Sox1P53783 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.8□□□□□ -1.8
Sox1P53783 Mir208a-201ENSMUST00000083498 83 ntBASIC3.8□□□□□ -1.8
Sox1P53783 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox1P53783 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sox1P53783 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sox1P53783 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sox1P53783 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Sox1P53783 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox1P53783 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sox1P53783 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm23492-201ENSMUST00000116837 115 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm14069-201ENSMUST00000120815 229 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm24053-201ENSMUST00000158620 105 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm22859-201ENSMUST00000174978 122 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm17067-202ENSMUST00000180131 123 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm6003-201ENSMUST00000187903 463 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm44376-201ENSMUST00000197570 128 ntBASIC3.79□□□□□ -1.8
Sox1P53783 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Mir504-201ENSMUST00000093602 79 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.79□□□□□ -1.8
Sox1P53783 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sox1P53783 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sox1P53783 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sox1P53783 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sox1P53783 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sox1P53783 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sox1P53783 Gm14020-201ENSMUST00000118165 662 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm14215-201ENSMUST00000120578 221 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm22956-201ENSMUST00000122520 80 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm11281-201ENSMUST00000141391 576 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm26022-201ENSMUST00000158663 108 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm21960-201ENSMUST00000181924 452 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Mir6371-201ENSMUST00000184470 111 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm43991-201ENSMUST00000203751 274 ntBASIC3.78□□□□□ -1.8
Sox1P53783 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm24705-201ENSMUST00000082808 107 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm24163-201ENSMUST00000093660 132 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.78□□□□□ -1.8
Sox1P53783 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.78□□□□□ -1.8
Sox1P53783 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sox1P53783 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sox1P53783 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
Sox1P53783 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.78□□□□□ -1.81
Sox1P53783 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sox1P53783 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sox1P53783 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sox1P53783 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sox1P53783 Gm15497-201ENSMUST00000119137 551 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm13797-201ENSMUST00000121792 120 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm26476-201ENSMUST00000122618 313 ntBASIC3.77□□□□□ -1.81
Sox1P53783 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Mir1966-201ENSMUST00000158807 108 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm16162-201ENSMUST00000162296 297 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.77□□□□□ -1.81
Sox1P53783 Gm18000-201ENSMUST00000212153 800 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm10298-201ENSMUST00000074801 265 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm23722-201ENSMUST00000083002 130 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm10351-201ENSMUST00000087694 125 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sox1P53783 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Sox1P53783 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.77□□□□□ -1.81
Sox1P53783 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Sox1P53783 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Sox1P53783 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Sox1P53783 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Sox1P53783 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 Gm26273-201ENSMUST00000104180 131 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Gm23651-201ENSMUST00000116755 120 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 Gm22036-201ENSMUST00000157279 215 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Gm22699-201ENSMUST00000175376 105 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Mir7068-201ENSMUST00000183439 74 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Gm37085-201ENSMUST00000193780 196 ntBASIC3.76□□□□□ -1.81
Sox1P53783 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Gm43155-201ENSMUST00000202661 494 ntBASIC3.76□□□□□ -1.81
Sox1P53783 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
Sox1P53783 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.76□□□□□ -1.81
Sox1P53783 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Sox1P53783 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms