Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm12954-201ENSMUST00000118610 611 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.34□□□□□ -1.87
Lig1P37913 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.34□□□□□ -1.87
Lig1P37913 Gm27723-201ENSMUST00000157398 63 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm5967-201ENSMUST00000172723 494 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm28000-201ENSMUST00000184380 85 ntBASIC3.34□□□□□ -1.87
Lig1P37913 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Lig1P37913 Gm36946-201ENSMUST00000192706 435 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm43583-201ENSMUST00000199235 303 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.34□□□□□ -1.87
Lig1P37913 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.34□□□□□ -1.87
Lig1P37913 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm23625-201ENSMUST00000082457 100 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm22685-201ENSMUST00000082848 106 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm22970-201ENSMUST00000083304 186 ntBASIC3.34□□□□□ -1.87
Lig1P37913 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.34□□□□□ -1.88
Lig1P37913 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lig1P37913 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lig1P37913 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Lig1P37913 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm23586-201ENSMUST00000157657 123 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Snora15-201ENSMUST00000177461 131 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Mir5123-201ENSMUST00000177794 83 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm1833-201ENSMUST00000191608 682 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm2077-201ENSMUST00000195017 319 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.33□□□□□ -1.88
Lig1P37913 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm44966-201ENSMUST00000208096 157 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.33□□□□□ -1.88
Lig1P37913 Gm46233-201ENSMUST00000217831 449 ntBASIC3.33□□□□□ -1.88
Lig1P37913 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.33□□□□□ -1.88
Lig1P37913 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.33□□□□□ -1.88
Lig1P37913 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm24042-201ENSMUST00000083114 103 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Gm26497-201ENSMUST00000083146 107 ntBASIC3.33□□□□□ -1.88
Lig1P37913 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Lig1P37913 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Lig1P37913 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Lig1P37913 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Lig1P37913 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lig1P37913 Gm24671-201ENSMUST00000104159 158 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm24890-201ENSMUST00000104389 102 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm14971-201ENSMUST00000117980 663 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm25270-201ENSMUST00000122606 138 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Lig1P37913 Gm23232-201ENSMUST00000157300 105 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm22961-201ENSMUST00000157964 106 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm24348-201ENSMUST00000158710 130 ntBASIC3.32□□□□□ -1.88
Lig1P37913 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Gm16289-201ENSMUST00000162079 183 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm17100-201ENSMUST00000168963 272 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm26928-201ENSMUST00000182674 572 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.32□□□□□ -1.88
Lig1P37913 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm43250-201ENSMUST00000196536 273 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Lig1P37913 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.32□□□□□ -1.88
Lig1P37913 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.32□□□□□ -1.88
Lig1P37913 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.32□□□□□ -1.88
Lig1P37913 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.32□□□□□ -1.88
Lig1P37913 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Gm25856-201ENSMUST00000082786 75 ntBASIC3.32□□□□□ -1.88
Lig1P37913 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Lig1P37913 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lig1P37913 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lig1P37913 Gm15282-201ENSMUST00000117707 300 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm15211-201ENSMUST00000118932 528 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm13210-201ENSMUST00000121483 273 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm15065-201ENSMUST00000121699 273 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Lig1P37913 Gm23713-201ENSMUST00000157353 70 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm22615-201ENSMUST00000158102 70 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Lig1P37913 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm34314-201ENSMUST00000203622 367 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm44010-201ENSMUST00000204432 331 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm9377-201ENSMUST00000207227 623 ntBASIC3.31□□□□□ -1.88
Lig1P37913 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.31□□□□□ -1.88
Lig1P37913 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Gm10025-201ENSMUST00000079568 372 ntBASIC3.31□□□□□ -1.88
Lig1P37913 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Lig1P37913 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lig1P37913 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lig1P37913 Mir693-201ENSMUST00000102187 89 ntBASIC3.3□□□□□ -1.88
Lig1P37913 Gm22674-201ENSMUST00000104413 131 ntBASIC3.3□□□□□ -1.88
Lig1P37913 Gm23474-201ENSMUST00000158884 75 ntBASIC3.3□□□□□ -1.88
Lig1P37913 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.3□□□□□ -1.88
Lig1P37913 Mir5136-201ENSMUST00000175573 76 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms