Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm27698-201ENSMUST00000184060 249 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.85□□□□□ -2.11
Col2a1P28481 Gm28843-201ENSMUST00000189198 678 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Gm29546-201ENSMUST00000191171 678 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Gm43193-201ENSMUST00000197732 441 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Gm44870-201ENSMUST00000207291 357 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Gm45730-201ENSMUST00000212560 395 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.85□□□□□ -2.11
Col2a1P28481 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.85□□□□□ -2.11
Col2a1P28481 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.85□□□□□ -2.11
Col2a1P28481 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col2a1P28481 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Col2a1P28481 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.84□□□□□ -2.11
Col2a1P28481 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col2a1P28481 Gm13153-201ENSMUST00000120969 637 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm14287-201ENSMUST00000121060 117 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm5958-201ENSMUST00000147698 297 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col2a1P28481 Gm22791-201ENSMUST00000157232 145 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm25391-201ENSMUST00000157342 134 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm23024-201ENSMUST00000158770 292 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm20462-201ENSMUST00000172623 408 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm24168-201ENSMUST00000178825 107 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Mir6338-201ENSMUST00000183389 109 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Mir6985-201ENSMUST00000184641 61 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.84□□□□□ -2.11
Col2a1P28481 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm19326-201ENSMUST00000219818 326 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Col2a1P28481 Gm22577-201ENSMUST00000083731 109 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm25411-201ENSMUST00000083760 151 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm26164-201ENSMUST00000083793 104 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm23850-201ENSMUST00000083830 169 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm26111-201ENSMUST00000083969 106 ntBASIC1.84□□□□□ -2.11
Col2a1P28481 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.84□□□□□ -2.12
Col2a1P28481 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.84□□□□□ -2.12
Col2a1P28481 Gm12255-201ENSMUST00000117184 284 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm11785-201ENSMUST00000120165 601 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm11819-201ENSMUST00000122192 372 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.83□□□□□ -2.12
Col2a1P28481 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Col2a1P28481 Gm25621-201ENSMUST00000157223 114 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm24191-201ENSMUST00000157977 122 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm25653-201ENSMUST00000158473 138 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm22665-201ENSMUST00000158720 275 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm23725-201ENSMUST00000177876 107 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col2a1P28481 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col2a1P28481 Gm26180-201ENSMUST00000179942 107 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col2a1P28481 Mir6240-201ENSMUST00000184281 117 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm28700-201ENSMUST00000187614 579 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.83□□□□□ -2.12
Col2a1P28481 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm44336-201ENSMUST00000203696 468 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm7751-201ENSMUST00000212868 709 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.83□□□□□ -2.12
Col2a1P28481 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col2a1P28481 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col2a1P28481 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col2a1P28481 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Col2a1P28481 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col2a1P28481 Gm13343-201ENSMUST00000116474 105 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm13714-201ENSMUST00000117313 221 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm7164-201ENSMUST00000117503 450 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm7123-201ENSMUST00000117647 213 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.82□□□□□ -2.12
Col2a1P28481 Gm22521-201ENSMUST00000158272 134 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm22434-201ENSMUST00000158549 122 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm8114-201ENSMUST00000172225 484 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm17919-201ENSMUST00000173344 312 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm23191-201ENSMUST00000179147 107 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Mir6383-201ENSMUST00000184545 116 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm27520-201ENSMUST00000184872 81 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm29192-201ENSMUST00000190942 377 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col2a1P28481 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.82□□□□□ -2.12
Col2a1P28481 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm24261-201ENSMUST00000083744 104 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm25512-201ENSMUST00000083863 107 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col2a1P28481 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col2a1P28481 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col2a1P28481 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm12191-201ENSMUST00000118307 348 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm9703-201ENSMUST00000119573 343 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm11556-201ENSMUST00000120751 288 ntBASIC1.82□□□□□ -2.12
Col2a1P28481 Gm24839-201ENSMUST00000122602 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms