Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd9P28357 Snord64-201ENSMUST00000104003 67 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm22779-201ENSMUST00000104085 107 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm23652-201ENSMUST00000116752 107 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm14282-201ENSMUST00000119484 240 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm3788-201ENSMUST00000119949 136 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm22561-201ENSMUST00000157331 84 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm26045-201ENSMUST00000157862 97 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm26084-201ENSMUST00000157903 104 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm24961-201ENSMUST00000157918 184 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Mir6715-201ENSMUST00000184990 57 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm43264-201ENSMUST00000202284 325 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm44429-201ENSMUST00000203542 186 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Gm22248-201ENSMUST00000082482 150 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Snord14d-201ENSMUST00000083424 86 ntBASIC3.76□□□□□ -1.81
Hoxd9P28357 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd9P28357 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.76□□□□□ -1.81
Hoxd9P28357 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Hoxd9P28357 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm23772-201ENSMUST00000104433 102 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm22679-201ENSMUST00000116975 100 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm13314-201ENSMUST00000118742 335 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm11281-201ENSMUST00000141391 576 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm25623-201ENSMUST00000157216 108 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm22558-201ENSMUST00000157326 95 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm22501-201ENSMUST00000158981 127 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm20438-201ENSMUST00000174441 329 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Mir1251-201ENSMUST00000175486 84 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm27733-201ENSMUST00000184803 68 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Mir129b-201ENSMUST00000197461 65 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Mir323-201ENSMUST00000083683 86 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Hoxd9P28357 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Hoxd9P28357 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd9P28357 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.75□□□□□ -1.81
Hoxd9P28357 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Hoxd9P28357 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd9P28357 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd9P28357 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd9P28357 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd9P28357 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd9P28357 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Hoxd9P28357 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm14299-201ENSMUST00000117586 397 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm13852-201ENSMUST00000122350 242 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm8840-201ENSMUST00000122454 386 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm27249-201ENSMUST00000185049 328 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm28828-201ENSMUST00000186601 696 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm29553-201ENSMUST00000189692 279 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm37116-201ENSMUST00000195161 147 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm44308-201ENSMUST00000197080 99 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm25797-201ENSMUST00000082640 107 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm25789-201ENSMUST00000083294 76 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd9P28357 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd9P28357 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.74□□□□□ -1.81
Hoxd9P28357 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd9P28357 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm24982-201ENSMUST00000104456 132 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm24318-201ENSMUST00000104490 131 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Mir294-201ENSMUST00000104710 84 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm24831-201ENSMUST00000116778 126 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm22141-201ENSMUST00000157403 277 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm24716-201ENSMUST00000157524 104 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm24086-201ENSMUST00000175171 98 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm25253-201ENSMUST00000179958 107 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Mir7014-201ENSMUST00000183853 63 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm44524-201ENSMUST00000203899 271 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Mir370-201ENSMUST00000083499 79 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm25681-201ENSMUST00000083938 106 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd9P28357 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd9P28357 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.73□□□□□ -1.81
Hoxd9P28357 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms