Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29639-201ENSMUST00000188375 580 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm28843-201ENSMUST00000189198 678 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm29546-201ENSMUST00000191171 678 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.69□□□□□ -2.3
Col1a1P11087 Gm44232-201ENSMUST00000204537 225 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm19441-201ENSMUST00000221545 330 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col1a1P11087 Gm22061-201ENSMUST00000082557 107 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm25008-201ENSMUST00000083809 81 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm22091-201ENSMUST00000116908 127 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm14594-201ENSMUST00000118052 537 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm14590-201ENSMUST00000118934 537 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm24419-201ENSMUST00000157875 332 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm22768-201ENSMUST00000158366 153 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm2966-201ENSMUST00000166052 481 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm14596-201ENSMUST00000180268 537 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm22418-201ENSMUST00000180326 107 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm14595-201ENSMUST00000180335 537 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Mir6896-201ENSMUST00000198033 73 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm44564-201ENSMUST00000207985 180 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.68□□□□□ -2.3
Col1a1P11087 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Gm22299-201ENSMUST00000082663 136 ntBASIC0.68□□□□□ -2.3
Col1a1P11087 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col1a1P11087 Gm13378-201ENSMUST00000117483 336 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm22111-201ENSMUST00000178010 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm23687-201ENSMUST00000178664 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm24566-201ENSMUST00000179286 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm23305-201ENSMUST00000179342 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm26389-201ENSMUST00000179819 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm22130-201ENSMUST00000179979 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm22393-201ENSMUST00000180153 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm25085-201ENSMUST00000180298 79 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm27588-201ENSMUST00000185096 263 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Col1a1P11087 Gm26207-201ENSMUST00000082909 104 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm13885-201ENSMUST00000117569 187 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm3027-201ENSMUST00000167579 451 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm16399-201ENSMUST00000181423 219 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm20118-201ENSMUST00000187207 162 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm37568-201ENSMUST00000191755 364 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.67□□□□□ -2.3
Col1a1P11087 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.67□□□□□ -2.3
Col1a1P11087 Gm44654-201ENSMUST00000208052 329 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm45366-201ENSMUST00000209828 384 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Gm45313-201ENSMUST00000210584 178 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Col1a1P11087 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.67□□□□□ -2.3
Col1a1P11087 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Col1a1P11087 Gm24431-201ENSMUST00000104073 66 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm22779-201ENSMUST00000104085 107 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm14530-201ENSMUST00000122391 333 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm22515-201ENSMUST00000158273 305 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm24573-201ENSMUST00000175499 112 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm25020-201ENSMUST00000178071 107 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Mir7077-201ENSMUST00000183991 57 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.66□□□□□ -2.3
Col1a1P11087 Gm43894-201ENSMUST00000203274 688 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm18729-201ENSMUST00000217230 621 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Mir429-201ENSMUST00000083493 83 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Gm25257-201ENSMUST00000083907 110 ntBASIC0.66□□□□□ -2.3
Col1a1P11087 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm13087-201ENSMUST00000118298 256 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm6272-201ENSMUST00000121256 171 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm15309-201ENSMUST00000121644 240 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm23983-201ENSMUST00000157142 114 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 Gm38154-201ENSMUST00000195444 340 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm44324-201ENSMUST00000198517 135 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.65□□□□□ -2.31
Col1a1P11087 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.65□□□□□ -2.31
Col1a1P11087 Olfr575-201ENSMUST00000084812 957 ntBASIC0.65□□□□□ -2.31
Col1a1P11087 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm11389-201ENSMUST00000121407 430 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm26213-201ENSMUST00000158582 110 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm17154-201ENSMUST00000165748 431 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm6660-201ENSMUST00000179149 468 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm26365-201ENSMUST00000179177 94 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm21726-201ENSMUST00000179654 392 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms