Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm23331-201ENSMUST00000157423 108 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm18775-201ENSMUST00000190763 586 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm44482-201ENSMUST00000199232 103 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm46312-201ENSMUST00000220961 420 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm23462-201ENSMUST00000083264 104 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.7□□□□□ -2.14
Chmp6P0C0A3 Gm14823-201ENSMUST00000117698 238 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm14624-201ENSMUST00000117746 192 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm15162-201ENSMUST00000119325 283 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm7925-201ENSMUST00000166690 401 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm9402-201ENSMUST00000196849 388 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm43583-201ENSMUST00000199235 303 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Gm2829-201ENSMUST00000213121 499 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Chmp6P0C0A3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm14785-201ENSMUST00000120185 539 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm23983-201ENSMUST00000157142 114 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Mir3086-201ENSMUST00000175072 87 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Snord87-201ENSMUST00000175437 87 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm24418-201ENSMUST00000177597 79 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm24639-201ENSMUST00000178518 79 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm23076-201ENSMUST00000179082 79 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm25077-201ENSMUST00000179157 79 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Mir6341-201ENSMUST00000183490 121 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm37923-201ENSMUST00000191624 161 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm37162-201ENSMUST00000191708 551 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm22997-201ENSMUST00000082845 107 ntBASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Chmp6P0C0A3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm12053-201ENSMUST00000119022 252 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm14362-201ENSMUST00000121679 273 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm24892-201ENSMUST00000122747 104 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm15254-201ENSMUST00000149567 273 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm25115-201ENSMUST00000157187 140 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm22556-201ENSMUST00000157803 100 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm23289-201ENSMUST00000175615 108 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Mir6355-201ENSMUST00000183687 106 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm29134-201ENSMUST00000186579 126 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm28337-201ENSMUST00000190425 666 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm31123-201ENSMUST00000192094 666 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Gm42960-201ENSMUST00000202160 241 ntBASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Chmp6P0C0A3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Mir301b-201ENSMUST00000102333 97 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm24419-201ENSMUST00000157875 332 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm22731-201ENSMUST00000158086 94 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm24638-201ENSMUST00000179807 132 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm28404-201ENSMUST00000190242 453 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm43556-201ENSMUST00000196186 681 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm22299-201ENSMUST00000082663 136 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm24805-201ENSMUST00000082931 104 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.66□□□□□ -2.14
Chmp6P0C0A3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm24481-201ENSMUST00000157210 102 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.65□□□□□ -2.15
Chmp6P0C0A3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Gm37869-201ENSMUST00000193385 595 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.65□□□□□ -2.15
Chmp6P0C0A3 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.65□□□□□ -2.15
Chmp6P0C0A3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms