| Hoxa1 | P09022 | Pak3-202 | ENSMUST00000112863 | 8657 nt | APPRIS ALT1 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr1229-202 | ENSMUST00000213883 | 3594 nt | APPRIS P1 TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm43379-201 | ENSMUST00000196253 | 7726 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Vmn1r19-201 | ENSMUST00000089830 | 2255 nt | APPRIS P1 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Zfp970-202 | ENSMUST00000108952 | 1569 nt | APPRIS P1 TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm15102-201 | ENSMUST00000118740 | 1502 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm19965-201 | ENSMUST00000179777 | 3030 nt | APPRIS P1 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr811-204 | ENSMUST00000217571 | 2399 nt | APPRIS P1 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Vmn2r66-201 | ENSMUST00000124773 | 2556 nt | APPRIS P1 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Igkv17-127-201 | ENSMUST00000103309 | 341 nt | APPRIS ALT2 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Igkv17-121-201 | ENSMUST00000103315 | 350 nt | APPRIS ALT2 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22658-201 | ENSMUST00000104196 | 155 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24282-201 | ENSMUST00000104232 | 66 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Mir872-201 | ENSMUST00000104728 | 81 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm14971-201 | ENSMUST00000117980 | 663 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm13432-201 | ENSMUST00000118861 | 241 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Mup-ps20-201 | ENSMUST00000121132 | 389 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm5396-201 | ENSMUST00000121222 | 532 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm12815-201 | ENSMUST00000121737 | 135 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm25454-201 | ENSMUST00000157947 | 315 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm26061-201 | ENSMUST00000175584 | 108 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24799-201 | ENSMUST00000178431 | 79 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm8739-201 | ENSMUST00000185962 | 181 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm29005-201 | ENSMUST00000186773 | 320 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm28848-201 | ENSMUST00000189984 | 168 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm44084-201 | ENSMUST00000203947 | 409 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Vmn1r-ps16-201 | ENSMUST00000204747 | 105 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC164161.1-201 | ENSMUST00000214076 | 639 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC122484.1-201 | ENSMUST00000221578 | 177 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC121942.2-201 | ENSMUST00000223824 | 600 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm9795-201 | ENSMUST00000062156 | 693 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22979-201 | ENSMUST00000082609 | 159 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24533-201 | ENSMUST00000083138 | 196 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr68-202 | ENSMUST00000216811 | 4093 nt | APPRIS P1 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr299-202 | ENSMUST00000217253 | 4479 nt | APPRIS P1 TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr110-201 | ENSMUST00000168318 | 1639 nt | APPRIS P1 TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm43780-201 | ENSMUST00000196510 | 3600 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Zfp985-201 | ENSMUST00000081742 | 2762 nt | APPRIS P1 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Vmn1r75-206 | ENSMUST00000228463 | 6508 nt | APPRIS P2 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm12686-201 | ENSMUST00000120546 | 397 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm26479-201 | ENSMUST00000122620 | 106 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm25805-201 | ENSMUST00000122788 | 108 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm13656-201 | ENSMUST00000123829 | 345 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm12958-201 | ENSMUST00000141242 | 674 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24601-201 | ENSMUST00000157970 | 143 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22316-201 | ENSMUST00000158012 | 216 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22192-201 | ENSMUST00000175128 | 85 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm21893-201 | ENSMUST00000179119 | 397 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm27374-201 | ENSMUST00000183660 | 81 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm27893-201 | ENSMUST00000184408 | 194 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm20058-201 | ENSMUST00000186939 | 284 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Sprr2h-202 | ENSMUST00000191886 | 297 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm37746-201 | ENSMUST00000193249 | 198 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm29865-201 | ENSMUST00000197726 | 451 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | 4930431L21Rik-202 | ENSMUST00000200253 | 624 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm10400-201 | ENSMUST00000203920 | 3835 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Tnfrsf23-203 | ENSMUST00000208017 | 544 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm44853-201 | ENSMUST00000209070 | 250 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC155923.1-201 | ENSMUST00000215676 | 356 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC153564.2-201 | ENSMUST00000219464 | 273 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC115735.2-201 | ENSMUST00000227135 | 351 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | 1700019M22Rik-201 | ENSMUST00000073560 | 354 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23925-201 | ENSMUST00000082471 | 132 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23723-201 | ENSMUST00000082996 | 132 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm25632-201 | ENSMUST00000083112 | 85 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23297-201 | ENSMUST00000083184 | 127 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr748-202 | ENSMUST00000213101 | 3632 nt | APPRIS P1 TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Cyp3a41a-201 | ENSMUST00000094111 | 2060 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Rag2-201 | ENSMUST00000044031 | 3424 nt | APPRIS P1 TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm26573-201 | ENSMUST00000181199 | 3020 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Vmn1r83-202 | ENSMUST00000226701 | 2788 nt | APPRIS P1 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Olfr1325-203 | ENSMUST00000216108 | 3535 nt | APPRIS ALT2 TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24119-201 | ENSMUST00000103979 | 246 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23705-201 | ENSMUST00000104370 | 130 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm15010-201 | ENSMUST00000117153 | 407 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm6574-201 | ENSMUST00000120037 | 362 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm26020-201 | ENSMUST00000122729 | 183 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22984-201 | ENSMUST00000122751 | 122 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | 4930517O19Rik-202 | ENSMUST00000145018 | 571 nt | TSL 3 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23326-201 | ENSMUST00000157419 | 105 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm26186-201 | ENSMUST00000157689 | 125 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm22766-201 | ENSMUST00000158372 | 99 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Agmo-205 | ENSMUST00000160768 | 741 nt | TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Mir6386-201 | ENSMUST00000183558 | 104 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Ighv12-2-201 | ENSMUST00000191949 | 362 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC154296.1-201 | ENSMUST00000198150 | 67 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm44223-201 | ENSMUST00000204854 | 114 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | E330011O21Rik-203 | ENSMUST00000210555 | 455 nt | TSL 5 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | D730003K21Rik-201 | ENSMUST00000215052 | 589 nt | TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | S100z-201 | ENSMUST00000022186 | 399 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | AC100209.2-201 | ENSMUST00000224461 | 451 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | 2210407C18Rik-201 | ENSMUST00000048801 | 876 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Defb21-201 | ENSMUST00000070722 | 427 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Spata45-201 | ENSMUST00000077889 | 432 nt | APPRIS P1 TSL 2 BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24147-201 | ENSMUST00000082763 | 144 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm24152-201 | ENSMUST00000082764 | 163 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm23247-201 | ENSMUST00000083373 | 107 nt | BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Tlr3-205 | ENSMUST00000209772 | 4096 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Mroh9-201 | ENSMUST00000096608 | 2956 nt | APPRIS P1 TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |
| Hoxa1 | P09022 | Gm3234-202 | ENSMUST00000223301 | 3250 nt | TSL 1 (best) BASIC | 2.47 | □□□□□ -2.01 | | |