Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm21135-201ENSMUST00000189023 436 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm37361-201ENSMUST00000194345 132 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm38041-201ENSMUST00000194445 661 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.78□□□□□ -2.28
TcraP01849 Gm29848-201ENSMUST00000203107 295 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm18242-201ENSMUST00000218455 542 ntBASIC0.78□□□□□ -2.28
TcraP01849 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.78□□□□□ -2.28
TcraP01849 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TcraP01849 Snora41-201ENSMUST00000082668 132 ntBASIC0.78□□□□□ -2.28
TcraP01849 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TcraP01849 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.77□□□□□ -2.29
TcraP01849 Gm26002-201ENSMUST00000101915 107 ntBASIC0.77□□□□□ -2.29
TcraP01849 Mir687-201ENSMUST00000102166 89 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm22543-201ENSMUST00000104347 94 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm15443-201ENSMUST00000118947 820 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm14599-201ENSMUST00000120469 474 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm11849-201ENSMUST00000121293 261 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm24896-201ENSMUST00000122741 135 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.77□□□□□ -2.29
TcraP01849 Gm25914-201ENSMUST00000157618 153 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm23641-201ENSMUST00000157857 101 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm24851-201ENSMUST00000158028 103 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm23208-201ENSMUST00000158666 127 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm20613-201ENSMUST00000175828 345 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm22584-201ENSMUST00000177935 92 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm24020-201ENSMUST00000180156 108 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm27028-201ENSMUST00000182303 399 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm9022-202ENSMUST00000183285 483 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm28344-201ENSMUST00000185704 279 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm42509-201ENSMUST00000197390 781 ntBASIC0.77□□□□□ -2.29
TcraP01849 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.77□□□□□ -2.29
TcraP01849 Gm2829-201ENSMUST00000213121 499 ntBASIC0.77□□□□□ -2.29
TcraP01849 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.77□□□□□ -2.29
TcraP01849 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.77□□□□□ -2.29
TcraP01849 Gm23299-201ENSMUST00000082708 79 ntBASIC0.77□□□□□ -2.29
TcraP01849 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.77□□□□□ -2.29
TcraP01849 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.77□□□□□ -2.29
TcraP01849 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.77□□□□□ -2.29
TcraP01849 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
TcraP01849 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
TcraP01849 Gm14551-201ENSMUST00000120802 256 ntBASIC0.76□□□□□ -2.29
TcraP01849 Gm23184-201ENSMUST00000122594 131 ntBASIC0.76□□□□□ -2.29
TcraP01849 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TcraP01849 Gm23230-201ENSMUST00000157298 133 ntBASIC0.76□□□□□ -2.29
TcraP01849 Gm22290-201ENSMUST00000177655 107 ntBASIC0.76□□□□□ -2.29
TcraP01849 Gm22583-201ENSMUST00000178031 107 ntBASIC0.76□□□□□ -2.29
TcraP01849 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TcraP01849 Gm19032-201ENSMUST00000208584 592 ntBASIC0.76□□□□□ -2.29
TcraP01849 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TcraP01849 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.76□□□□□ -2.29
TcraP01849 Gm22780-201ENSMUST00000104084 132 ntBASIC0.75□□□□□ -2.29
TcraP01849 Mir466n-201ENSMUST00000104798 94 ntBASIC0.75□□□□□ -2.29
TcraP01849 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TcraP01849 Gm12053-201ENSMUST00000119022 252 ntBASIC0.75□□□□□ -2.29
TcraP01849 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm25059-201ENSMUST00000157367 117 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm24480-201ENSMUST00000157442 103 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm22186-201ENSMUST00000157822 122 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm23858-201ENSMUST00000158384 106 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm20438-201ENSMUST00000174441 329 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
TcraP01849 Gm27419-201ENSMUST00000184576 109 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm27640-201ENSMUST00000184580 147 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm28995-201ENSMUST00000186625 261 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm38274-201ENSMUST00000195689 148 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm18546-201ENSMUST00000197245 676 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm43529-201ENSMUST00000199178 412 ntBASIC0.75□□□□□ -2.29
TcraP01849 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC0.75□□□□□ -2.29
TcraP01849 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.75□□□□□ -2.29
TcraP01849 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.75□□□□□ -2.29
TcraP01849 Gm14931-201ENSMUST00000111079 253 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm8858-201ENSMUST00000118259 342 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm12512-201ENSMUST00000119620 217 ntBASIC0.74□□□□□ -2.29
TcraP01849 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm11891-201ENSMUST00000121241 619 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm14765-201ENSMUST00000121954 326 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm14366-201ENSMUST00000121970 730 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm23854-201ENSMUST00000158378 108 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm22076-201ENSMUST00000158601 84 ntBASIC0.74□□□□□ -2.29
TcraP01849 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm24366-201ENSMUST00000175383 86 ntBASIC0.74□□□□□ -2.29
TcraP01849 Mir3098-201ENSMUST00000175416 87 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm24168-201ENSMUST00000178825 107 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm27898-201ENSMUST00000183987 80 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm27660-201ENSMUST00000184028 208 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm37727-201ENSMUST00000191637 819 ntBASIC0.74□□□□□ -2.29
TcraP01849 Trbv24-201ENSMUST00000194614 347 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm18971-201ENSMUST00000197240 374 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm45232-201ENSMUST00000207811 162 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm18854-201ENSMUST00000211196 329 ntBASIC0.74□□□□□ -2.29
TcraP01849 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.74□□□□□ -2.29
TcraP01849 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TcraP01849 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.74□□□□□ -2.29
TcraP01849 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TcraP01849 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.74□□□□□ -2.29
TcraP01849 Gm25938-201ENSMUST00000104139 166 ntBASIC0.73□□□□□ -2.29
TcraP01849 Gm23011-201ENSMUST00000104148 132 ntBASIC0.73□□□□□ -2.29
TcraP01849 Gm16412-201ENSMUST00000121602 273 ntBASIC0.73□□□□□ -2.29
TcraP01849 Gm6568-201ENSMUST00000122274 697 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms