Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm24582-201ENSMUST00000103967 103 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Mdga2-203ENSMUST00000113942 423 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm15536-201ENSMUST00000121411 114 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm22038-201ENSMUST00000157277 242 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm23713-201ENSMUST00000157353 70 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm23641-201ENSMUST00000157857 101 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm22615-201ENSMUST00000158102 70 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm22664-201ENSMUST00000158719 105 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm25642-201ENSMUST00000175137 66 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm29231-201ENSMUST00000179850 319 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm27660-201ENSMUST00000184028 208 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Mir6901-201ENSMUST00000185062 62 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.74□□□□□ -2.13
Cdh16O88338 Gm43367-201ENSMUST00000199986 625 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm44870-201ENSMUST00000207291 357 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm44533-201ENSMUST00000207782 268 ntBASIC1.74□□□□□ -2.13
Cdh16O88338 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm22834-201ENSMUST00000102021 79 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm26077-201ENSMUST00000104064 123 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm15030-201ENSMUST00000119804 484 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm11522-201ENSMUST00000120533 176 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm13903-201ENSMUST00000120945 193 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.73□□□□□ -2.13
Cdh16O88338 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.73□□□□□ -2.13
Cdh16O88338 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.73□□□□□ -2.13
Cdh16O88338 Gm23016-201ENSMUST00000158431 62 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.73□□□□□ -2.13
Cdh16O88338 Gm20543-201ENSMUST00000174200 726 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm25314-201ENSMUST00000178810 79 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm23862-201ENSMUST00000180342 94 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm27722-201ENSMUST00000183908 76 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Cdh16O88338 Gm32175-201ENSMUST00000193641 346 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm45365-201ENSMUST00000209489 256 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm45240-201ENSMUST00000211437 674 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Gm20102-201ENSMUST00000222445 220 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Mir10a-201ENSMUST00000083585 110 ntBASIC1.73□□□□□ -2.13
Cdh16O88338 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cdh16O88338 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cdh16O88338 Gm25485-201ENSMUST00000104120 132 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cdh16O88338 Gm11359-201ENSMUST00000120039 567 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm22227-201ENSMUST00000157356 259 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm24191-201ENSMUST00000157977 122 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm25711-201ENSMUST00000158633 128 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm26194-201ENSMUST00000175036 71 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm26335-201ENSMUST00000178449 107 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Cdh16O88338 Gm26180-201ENSMUST00000179942 107 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Mir6351-201ENSMUST00000183826 99 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cdh16O88338 Mir7118-201ENSMUST00000197760 61 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm43578-201ENSMUST00000201250 459 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm44844-201ENSMUST00000207242 336 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm46312-201ENSMUST00000220961 420 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm25579-201ENSMUST00000083407 106 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 Gm24412-201ENSMUST00000083426 109 ntBASIC1.72□□□□□ -2.13
Cdh16O88338 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.72□□□□□ -2.13
Cdh16O88338 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cdh16O88338 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cdh16O88338 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Cdh16O88338 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Cdh16O88338 Gm12255-201ENSMUST00000117184 284 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Gm14823-201ENSMUST00000117698 238 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Snord11-201ENSMUST00000158468 84 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.71□□□□□ -2.14
Cdh16O88338 Gm28058-201ENSMUST00000186421 264 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cdh16O88338 Mir107-201ENSMUST00000083660 87 ntBASIC1.71□□□□□ -2.14
Cdh16O88338 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdh16O88338 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdh16O88338 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdh16O88338 Gm13728-201ENSMUST00000117471 400 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm11386-201ENSMUST00000117761 347 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm15211-201ENSMUST00000118932 528 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.7□□□□□ -2.14
Cdh16O88338 Gm26278-201ENSMUST00000157098 132 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm22389-201ENSMUST00000158193 301 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm26157-201ENSMUST00000158974 126 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm22192-201ENSMUST00000175128 85 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 Gm23725-201ENSMUST00000177876 107 ntBASIC1.7□□□□□ -2.14
Cdh16O88338 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Cdh16O88338 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.7□□□□□ -2.14
Cdh16O88338 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms