Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22508-201ENSMUST00000082772 110 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm25853-201ENSMUST00000082793 132 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm23242-201ENSMUST00000083055 107 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm24043-201ENSMUST00000083108 116 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm25578-201ENSMUST00000083406 104 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Snord14d-201ENSMUST00000083424 86 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col5a1O88207 Gm11693-201ENSMUST00000119625 565 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm13153-201ENSMUST00000120969 637 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm23887-201ENSMUST00000122683 172 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm25970-201ENSMUST00000157165 86 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm23435-201ENSMUST00000157183 156 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm17919-201ENSMUST00000173344 312 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm26195-201ENSMUST00000175035 101 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm24168-201ENSMUST00000178825 107 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm11395-201ENSMUST00000181011 499 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Mir6995-201ENSMUST00000183658 71 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.46□□□□□ -2.18
Col5a1O88207 Gm20885-201ENSMUST00000190192 654 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Mir7217-201ENSMUST00000200304 62 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.46□□□□□ -2.18
Col5a1O88207 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Col5a1O88207 Gm25079-201ENSMUST00000082529 203 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Mir30d-201ENSMUST00000083503 82 ntBASIC1.46□□□□□ -2.18
Col5a1O88207 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col5a1O88207 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col5a1O88207 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm12053-201ENSMUST00000119022 252 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm13409-201ENSMUST00000122072 546 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm22491-201ENSMUST00000157190 102 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm23122-201ENSMUST00000157645 103 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm22136-201ENSMUST00000158751 268 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm3104-201ENSMUST00000171004 473 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm20543-201ENSMUST00000174200 726 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm25361-201ENSMUST00000179358 76 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir6379-201ENSMUST00000183392 115 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir7663-201ENSMUST00000183950 61 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir6950-201ENSMUST00000184438 73 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir6383-201ENSMUST00000184545 116 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm28090-201ENSMUST00000189458 664 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm33354-201ENSMUST00000195448 906 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm6059-201ENSMUST00000196903 340 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.45□□□□□ -2.18
Col5a1O88207 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.45□□□□□ -2.18
Col5a1O88207 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm26154-201ENSMUST00000102339 96 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm23015-201ENSMUST00000104145 128 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm25416-201ENSMUST00000104221 107 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir669i-201ENSMUST00000117007 127 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm14868-201ENSMUST00000117840 216 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm22791-201ENSMUST00000157232 145 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm23411-201ENSMUST00000157988 62 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm23016-201ENSMUST00000158431 62 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm7925-201ENSMUST00000166690 401 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm17062-201ENSMUST00000166987 461 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Cfap61-214ENSMUST00000167179 183 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm25314-201ENSMUST00000178810 79 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.45□□□□□ -2.18
Col5a1O88207 Gm19777-201ENSMUST00000191940 358 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm43472-201ENSMUST00000200175 154 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm45402-201ENSMUST00000211796 223 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm16976-205ENSMUST00000227324 226 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col5a1O88207 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col5a1O88207 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Mir196b-201ENSMUST00000083509 85 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Gm22365-201ENSMUST00000093750 117 ntBASIC1.45□□□□□ -2.18
Col5a1O88207 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col5a1O88207 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.45□□□□□ -2.18
Col5a1O88207 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col5a1O88207 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col5a1O88207 Gm22656-201ENSMUST00000104199 171 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm15175-201ENSMUST00000117629 132 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm14594-201ENSMUST00000118052 537 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm14590-201ENSMUST00000118934 537 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm11384-201ENSMUST00000121376 303 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm25624-201ENSMUST00000157222 275 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm25653-201ENSMUST00000158473 138 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col5a1O88207 Gm14596-201ENSMUST00000180268 537 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm14595-201ENSMUST00000180335 537 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm28058-201ENSMUST00000186421 264 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm29352-201ENSMUST00000188054 544 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm44149-201ENSMUST00000204256 226 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col5a1O88207 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm23515-201ENSMUST00000082829 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms