Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm25632-201ENSMUST00000083112 85 ntBASIC2.24□□□□□ -2.05
Trav13d-3J3QMG8 Gm23246-201ENSMUST00000083371 67 ntBASIC2.24□□□□□ -2.05
Trav13d-3J3QMG8 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Trav13d-3J3QMG8 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.24□□□□□ -2.05
Trav13d-3J3QMG8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.24□□□□□ -2.05
Trav13d-3J3QMG8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm23747-201ENSMUST00000104228 131 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm26247-201ENSMUST00000116702 91 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm24275-201ENSMUST00000116780 146 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm9850-201ENSMUST00000117916 227 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm25781-201ENSMUST00000122527 84 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm25269-201ENSMUST00000122601 104 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm23120-201ENSMUST00000157654 287 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm20718-201ENSMUST00000176058 259 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm27379-201ENSMUST00000183730 123 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm29597-201ENSMUST00000188035 308 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm44337-201ENSMUST00000196553 114 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm19572-201ENSMUST00000214326 338 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm19118-201ENSMUST00000222554 98 ntBASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Trav13d-3J3QMG8 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm24670-201ENSMUST00000104154 132 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm23175-201ENSMUST00000104371 132 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm15844-201ENSMUST00000118016 576 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm26255-201ENSMUST00000122492 103 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm28282-201ENSMUST00000186072 186 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Gm26265-201ENSMUST00000083277 135 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.22□□□□□ -2.05
Trav13d-3J3QMG8 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Trav13d-3J3QMG8 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm23987-201ENSMUST00000117039 129 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm13439-201ENSMUST00000117541 409 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm23599-201ENSMUST00000157261 251 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm24504-201ENSMUST00000157679 100 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm24737-201ENSMUST00000158861 100 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm9830-201ENSMUST00000178509 357 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm22263-201ENSMUST00000180060 104 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm45452-201ENSMUST00000210905 177 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trav13d-3J3QMG8 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Mir682-201ENSMUST00000102281 96 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm8260-201ENSMUST00000119230 353 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm12793-201ENSMUST00000119268 292 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm13729-201ENSMUST00000120328 406 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm14215-201ENSMUST00000120578 221 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm25153-201ENSMUST00000157118 156 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm25020-201ENSMUST00000178071 107 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm25284-201ENSMUST00000180345 141 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Mir6951-201ENSMUST00000183910 75 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm28848-201ENSMUST00000189984 168 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm28288-201ENSMUST00000191019 214 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm32033-201ENSMUST00000193483 339 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm43914-201ENSMUST00000203592 594 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Snord68-201ENSMUST00000082516 86 ntBASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Trav13d-3J3QMG8 Gm14296-202ENSMUST00000108931 750 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm22032-201ENSMUST00000116946 116 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm22151-201ENSMUST00000116963 58 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm13862-201ENSMUST00000121220 197 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm25625-201ENSMUST00000157221 96 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm22316-201ENSMUST00000158012 216 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm26400-201ENSMUST00000175012 85 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm24388-201ENSMUST00000177872 107 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms