Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm10042-201ENSMUST00000079884 78 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm23727-201ENSMUST00000083352 164 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm24762-201ENSMUST00000083689 104 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.2□□□□□ -1.9
Pcdh1F7BJK1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm17067-202ENSMUST00000180131 123 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm27869-201ENSMUST00000184327 122 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm29167-201ENSMUST00000190024 377 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm44524-201ENSMUST00000203899 271 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm45543-201ENSMUST00000209327 88 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Pcdh1F7BJK1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm11460-201ENSMUST00000118200 361 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm23536-201ENSMUST00000157541 134 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm24015-201ENSMUST00000157725 232 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm22521-201ENSMUST00000158272 134 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm10357-201ENSMUST00000159886 264 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm37791-201ENSMUST00000195081 286 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Pcdh1F7BJK1 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm23492-201ENSMUST00000116837 115 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm25321-201ENSMUST00000122558 102 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm23098-201ENSMUST00000157552 299 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm27648-201ENSMUST00000184315 107 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm37343-201ENSMUST00000192542 111 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm37698-201ENSMUST00000192605 463 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Snord80-202ENSMUST00000199023 77 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Mir721-201ENSMUST00000200230 88 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm45013-201ENSMUST00000206883 178 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm25856-201ENSMUST00000082786 75 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Gm24163-201ENSMUST00000093660 132 ntBASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Pcdh1F7BJK1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm24605-201ENSMUST00000104772 96 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm23112-201ENSMUST00000158606 125 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm24056-201ENSMUST00000158617 146 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Mir5710-201ENSMUST00000176884 69 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Mir713-201ENSMUST00000178651 108 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm27753-201ENSMUST00000184742 203 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm42623-201ENSMUST00000197225 379 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 AC150901.1-201ENSMUST00000208407 145 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm25812-201ENSMUST00000082751 103 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm22443-201ENSMUST00000082890 107 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Mir137-201ENSMUST00000083635 73 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Pcdh1F7BJK1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Gm7123-201ENSMUST00000117647 213 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Gm25424-201ENSMUST00000157612 58 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Gm23592-201ENSMUST00000157859 117 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Gm19774-201ENSMUST00000190667 114 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms