Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Snora34-201ENSMUST00000083402 138 ntBASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Trav12-1A0N8R1 Gm12825-201ENSMUST00000120249 563 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm22482-201ENSMUST00000122563 359 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Mir1942-201ENSMUST00000157274 63 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Mir1954-201ENSMUST00000175595 86 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm26968-201ENSMUST00000182894 481 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm28912-201ENSMUST00000189001 234 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm44465-201ENSMUST00000199536 114 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm18252-203ENSMUST00000215855 757 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Gm24624-201ENSMUST00000082617 164 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.39□□□□□ -2.35
Trav12-1A0N8R1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm23691-201ENSMUST00000101878 107 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm27420-201ENSMUST00000183823 79 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm27245-201ENSMUST00000184385 376 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Mir7052-201ENSMUST00000184821 65 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm28560-201ENSMUST00000186091 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm28334-201ENSMUST00000186653 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm28495-201ENSMUST00000188452 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm28232-201ENSMUST00000188683 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm28481-201ENSMUST00000189231 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm29059-201ENSMUST00000191534 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm37765-201ENSMUST00000192395 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm37237-201ENSMUST00000192893 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm36968-201ENSMUST00000193737 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm38290-201ENSMUST00000195238 315 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm44961-201ENSMUST00000207450 196 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm23517-201ENSMUST00000082830 192 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.38□□□□□ -2.35
Trav12-1A0N8R1 Gm23203-201ENSMUST00000104374 107 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm14558-201ENSMUST00000117458 381 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm14358-201ENSMUST00000118458 403 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm23956-201ENSMUST00000157211 119 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Snora24-201ENSMUST00000174989 130 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm26365-201ENSMUST00000179177 94 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm28862-201ENSMUST00000188246 163 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm45375-201ENSMUST00000210338 280 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Gm45912-201ENSMUST00000210646 543 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.37□□□□□ -2.35
Trav12-1A0N8R1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm14600-201ENSMUST00000121032 630 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Mir6335-201ENSMUST00000184081 98 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm29167-201ENSMUST00000190024 377 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm9251-201ENSMUST00000197202 628 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm45101-201ENSMUST00000208327 232 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm20102-201ENSMUST00000222445 220 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm9795-201ENSMUST00000062156 693 ntBASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Trav12-1A0N8R1 Gm12507-201ENSMUST00000119155 415 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm15193-201ENSMUST00000120224 865 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm25011-201ENSMUST00000158398 126 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm24388-201ENSMUST00000177872 107 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm36956-201ENSMUST00000193830 214 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm43432-201ENSMUST00000196352 121 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm44326-201ENSMUST00000198226 101 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm44232-201ENSMUST00000204537 225 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm44830-201ENSMUST00000207667 584 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm44655-201ENSMUST00000207768 423 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm19709-201ENSMUST00000215403 482 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm46103-201ENSMUST00000217614 341 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm18696-201ENSMUST00000220103 274 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm25851-201ENSMUST00000082794 107 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Mir33-201ENSMUST00000083531 69 ntBASIC0.35□□□□□ -2.35
Trav12-1A0N8R1 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms