Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm22265-201ENSMUST00000082947 116 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Olfr575-201ENSMUST00000084812 957 ntBASIC-0.03□□□□□ -2.41
Trav4-3A0A0B4J1K1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm24271-201ENSMUST00000102327 111 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26082-201ENSMUST00000104070 127 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm6272-201ENSMUST00000121256 171 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm21978-201ENSMUST00000179696 377 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm18213-201ENSMUST00000207850 178 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm24624-201ENSMUST00000082617 164 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm43877-201ENSMUST00000205029 2238 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37642-201ENSMUST00000193166 1735 ntBASIC-0.04□□□□□ -2.42
Trav4-3A0A0B4J1K1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm15452-201ENSMUST00000119877 240 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm12304-201ENSMUST00000120312 385 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm25432-201ENSMUST00000158284 66 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm25012-201ENSMUST00000158396 164 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mir3061-201ENSMUST00000175129 91 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mir15a-201ENSMUST00000175266 84 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mir7052-201ENSMUST00000184821 65 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28700-201ENSMUST00000187614 579 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm23975-201ENSMUST00000082685 106 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm45577-201ENSMUST00000210206 2287 ntBASIC-0.05□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm23015-201ENSMUST00000104145 128 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm13087-201ENSMUST00000118298 256 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Snrpert-201ENSMUST00000121967 279 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22228-201ENSMUST00000157364 101 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm23106-201ENSMUST00000157554 101 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm25312-201ENSMUST00000178972 107 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 AL928567.1-201ENSMUST00000197891 138 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm18703-201ENSMUST00000215318 333 ntBASIC-0.06□□□□□ -2.42
Trav4-3A0A0B4J1K1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26377-201ENSMUST00000102184 108 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14677-201ENSMUST00000117866 486 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14793-201ENSMUST00000118739 311 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm13080-201ENSMUST00000120556 420 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 AA413626-201ENSMUST00000121125 494 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22098-201ENSMUST00000157930 85 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm44857-201ENSMUST00000208331 196 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.07□□□□□ -2.42
Trav4-3A0A0B4J1K1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm15176-201ENSMUST00000117734 135 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14946-201ENSMUST00000119859 296 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 n-R5s70-201ENSMUST00000122650 116 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22800-201ENSMUST00000175627 94 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22307-201ENSMUST00000180019 107 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37713-201ENSMUST00000191746 198 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37319-201ENSMUST00000193500 636 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37997-201ENSMUST00000193515 267 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Snord95-201ENSMUST00000082846 68 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22740-201ENSMUST00000083439 109 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm38388-201ENSMUST00000195569 1430 ntBASIC-0.08□□□□□ -2.42
Trav4-3A0A0B4J1K1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mup-ps14-201ENSMUST00000118437 532 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14269-201ENSMUST00000120455 306 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14364-201ENSMUST00000129209 267 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm23435-201ENSMUST00000157183 156 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26371-201ENSMUST00000157829 104 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm25839-201ENSMUST00000158921 103 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm22510-201ENSMUST00000179304 79 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26336-201ENSMUST00000179449 79 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm25457-201ENSMUST00000179509 107 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26390-201ENSMUST00000179628 79 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28110-201ENSMUST00000185782 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29057-201ENSMUST00000186468 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28737-201ENSMUST00000186808 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29147-201ENSMUST00000186846 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29118-201ENSMUST00000186908 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28433-201ENSMUST00000187085 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29227-201ENSMUST00000187139 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28759-201ENSMUST00000187621 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28831-201ENSMUST00000187739 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29034-201ENSMUST00000188099 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28752-201ENSMUST00000188340 315 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms