Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Upk3aQ9JKX8 Gm45730-201ENSMUST00000212560 395 ntBASIC1.78□□□□□ -2.12
Upk3aQ9JKX8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Upk3aQ9JKX8 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Upk3aQ9JKX8 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Upk3aQ9JKX8 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm23109-201ENSMUST00000116867 126 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm15692-201ENSMUST00000152173 352 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm23000-201ENSMUST00000157083 139 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm25454-201ENSMUST00000157947 315 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm24837-201ENSMUST00000158683 81 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm28058-201ENSMUST00000186421 264 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm29350-201ENSMUST00000189141 541 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Mir691-201ENSMUST00000199719 78 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm26328-201ENSMUST00000082821 107 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm25794-201ENSMUST00000083286 107 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm22577-201ENSMUST00000083731 109 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.77□□□□□ -2.13
Upk3aQ9JKX8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm26102-201ENSMUST00000157251 284 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm23381-201ENSMUST00000157676 94 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm22803-201ENSMUST00000158049 283 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm24858-201ENSMUST00000158058 323 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm7925-201ENSMUST00000166690 401 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm24656-201ENSMUST00000177548 132 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm27385-201ENSMUST00000184747 104 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Mir7678-201ENSMUST00000185076 71 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm18971-201ENSMUST00000197240 374 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm42807-201ENSMUST00000200141 329 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Upk3aQ9JKX8 Gm11835-201ENSMUST00000120635 663 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm22073-201ENSMUST00000122668 189 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Mir669n-201ENSMUST00000158636 54 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm23813-201ENSMUST00000175153 77 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Mir6406-201ENSMUST00000183592 120 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Mir7026-201ENSMUST00000184384 67 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm37778-201ENSMUST00000191732 190 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Snord43-201ENSMUST00000199549 108 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm24151-201ENSMUST00000082758 141 ntBASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Upk3aQ9JKX8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm22750-201ENSMUST00000102076 103 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Mir758-201ENSMUST00000103260 81 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Mir743b-201ENSMUST00000104751 77 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm15067-201ENSMUST00000119534 156 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm12926-201ENSMUST00000121158 409 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm25113-201ENSMUST00000157185 143 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm23523-201ENSMUST00000180190 107 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm27313-201ENSMUST00000183500 142 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm28343-201ENSMUST00000185386 112 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm9402-201ENSMUST00000196849 388 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm43680-201ENSMUST00000199466 340 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm44336-201ENSMUST00000203696 468 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Snora33-201ENSMUST00000093556 129 ntBASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Upk3aQ9JKX8 Gm23641-201ENSMUST00000157857 101 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm24053-201ENSMUST00000158620 105 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm25162-201ENSMUST00000158906 159 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm19932-201ENSMUST00000177033 313 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm21978-201ENSMUST00000179696 377 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Upk3aQ9JKX8 Gm28437-201ENSMUST00000190277 783 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms