Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Snord13-201ENSMUST00000157627 104 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm22727-201ENSMUST00000158090 116 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm24358-201ENSMUST00000158424 288 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm24551-201ENSMUST00000158645 92 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm22500-201ENSMUST00000158982 99 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Mir3075-201ENSMUST00000175340 85 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm26622-201ENSMUST00000180520 298 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm27248-201ENSMUST00000184004 166 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm37599-201ENSMUST00000193067 489 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm18971-201ENSMUST00000197240 374 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm44881-201ENSMUST00000205425 367 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm45226-201ENSMUST00000206602 288 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm44923-201ENSMUST00000206673 85 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm32300-201ENSMUST00000221735 515 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Mir653-201ENSMUST00000102402 85 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm4732-201ENSMUST00000118778 473 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm24892-201ENSMUST00000122747 104 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm25384-201ENSMUST00000157807 105 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm25863-201ENSMUST00000158249 329 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Mir6916-201ENSMUST00000184514 63 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm44477-201ENSMUST00000199661 110 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm44910-201ENSMUST00000208451 396 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm24977-201ENSMUST00000083106 163 ntBASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trem1Q9JKE2 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Mir582-201ENSMUST00000103758 81 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm11359-201ENSMUST00000120039 567 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm12779-201ENSMUST00000121496 143 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm14362-201ENSMUST00000121679 273 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm14972-201ENSMUST00000121780 364 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm6956-201ENSMUST00000134724 546 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm15254-201ENSMUST00000149567 273 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm23000-201ENSMUST00000157083 139 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Mir7021-201ENSMUST00000197026 63 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.53□□□□□ -2.16
Trem1Q9JKE2 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.53□□□□□ -2.16
Trem1Q9JKE2 Gm24098-201ENSMUST00000102075 109 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm25381-201ENSMUST00000102078 109 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm24079-201ENSMUST00000104352 132 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm25529-201ENSMUST00000104850 92 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm23120-201ENSMUST00000157654 287 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm24851-201ENSMUST00000158028 103 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm23548-201ENSMUST00000158963 106 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm23144-201ENSMUST00000180226 107 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm38333-201ENSMUST00000193608 604 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm37533-201ENSMUST00000193848 545 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm45658-201ENSMUST00000209197 580 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.52□□□□□ -2.17
Trem1Q9JKE2 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm25651-201ENSMUST00000083782 119 ntBASIC1.52□□□□□ -2.17
Trem1Q9JKE2 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm26384-201ENSMUST00000102183 110 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Mir374b-201ENSMUST00000102314 95 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm25269-201ENSMUST00000122601 104 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm22328-201ENSMUST00000158074 112 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm22891-201ENSMUST00000158641 164 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm3111-201ENSMUST00000167426 490 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm20689-201ENSMUST00000176033 279 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm24418-201ENSMUST00000177597 79 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm23725-201ENSMUST00000177876 107 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm24639-201ENSMUST00000178518 79 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm23076-201ENSMUST00000179082 79 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm25077-201ENSMUST00000179157 79 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Mir496b-201ENSMUST00000184935 113 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Mir6901-201ENSMUST00000185062 62 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm18546-201ENSMUST00000197245 676 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Gm44870-201ENSMUST00000207291 357 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms