Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm22657-201ENSMUST00000104197 132 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Snord89-201ENSMUST00000104516 110 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm14816-201ENSMUST00000117174 294 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm13443-201ENSMUST00000120770 555 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm26049-201ENSMUST00000157313 108 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm24739-201ENSMUST00000158855 292 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm17161-201ENSMUST00000169187 524 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Mir6715-201ENSMUST00000184990 57 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm42834-201ENSMUST00000196845 256 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm42739-201ENSMUST00000200687 226 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.7□□□□□ -1.82
Trim39Q9ESN2 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Snord14c-201ENSMUST00000101927 86 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm14518-201ENSMUST00000117351 542 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm23231-201ENSMUST00000157299 104 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm22726-201ENSMUST00000158089 179 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm26036-201ENSMUST00000158149 144 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm28159-201ENSMUST00000190296 696 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Gm5548-201ENSMUST00000055878 397 ntBASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim39Q9ESN2 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Mir193b-201ENSMUST00000103784 79 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm24855-201ENSMUST00000104848 97 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm26249-201ENSMUST00000116708 118 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm23178-201ENSMUST00000116782 95 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm25177-201ENSMUST00000122634 117 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm26157-201ENSMUST00000158974 126 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Mir6996-201ENSMUST00000183922 61 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm26265-202ENSMUST00000196326 133 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm22299-201ENSMUST00000082663 136 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm25142-201ENSMUST00000082698 107 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Mir488-201ENSMUST00000093595 109 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim39Q9ESN2 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm22967-201ENSMUST00000157956 239 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm24056-201ENSMUST00000158617 146 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm22192-201ENSMUST00000175128 85 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm24811-201ENSMUST00000175313 100 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Mir6391-201ENSMUST00000184391 104 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm28155-201ENSMUST00000191066 151 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm44052-201ENSMUST00000203382 396 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm25632-201ENSMUST00000083112 85 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Snora31-201ENSMUST00000083213 130 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm10172-201ENSMUST00000085929 558 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.67□□□□□ -1.82
Trim39Q9ESN2 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm6952-201ENSMUST00000118629 159 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm12351-201ENSMUST00000118727 292 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm12897-201ENSMUST00000120341 250 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm15861-201ENSMUST00000120979 339 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm24141-201ENSMUST00000122776 115 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm11281-201ENSMUST00000141391 576 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm25965-201ENSMUST00000157170 93 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm22553-201ENSMUST00000157797 295 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm23337-201ENSMUST00000158959 118 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Mir7031-201ENSMUST00000183860 65 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm27869-201ENSMUST00000184327 122 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm27611-201ENSMUST00000184690 108 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm38356-201ENSMUST00000194313 408 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.66□□□□□ -1.82
Trim39Q9ESN2 Gm22304-201ENSMUST00000082688 129 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms