Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm37417-201ENSMUST00000195257 454 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm44964-201ENSMUST00000207011 273 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm45296-201ENSMUST00000209625 205 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm22806-201ENSMUST00000082738 136 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm22353-201ENSMUST00000083918 136 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.48□□□□□ -1.85
Ushbp1Q8R370 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm24084-201ENSMUST00000175173 137 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm23921-201ENSMUST00000175258 107 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm26061-201ENSMUST00000175584 108 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm6660-201ENSMUST00000179149 468 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm27893-201ENSMUST00000184408 194 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm28825-201ENSMUST00000186233 238 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Mir7661-201ENSMUST00000197023 61 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm10088-201ENSMUST00000074116 423 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm22571-201ENSMUST00000082984 70 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gm26497-201ENSMUST00000083146 107 ntBASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ushbp1Q8R370 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Ushbp1Q8R370 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Ushbp1Q8R370 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.46□□□□□ -1.85
Ushbp1Q8R370 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm24172-201ENSMUST00000104127 117 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm12815-201ENSMUST00000121737 135 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm24629-201ENSMUST00000122762 89 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm24909-201ENSMUST00000157290 280 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm43583-201ENSMUST00000199235 303 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm22979-201ENSMUST00000082609 159 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.46□□□□□ -1.86
Ushbp1Q8R370 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ushbp1Q8R370 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm26500-201ENSMUST00000101867 106 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm24671-201ENSMUST00000104159 158 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm15714-201ENSMUST00000117168 250 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm27723-201ENSMUST00000157398 63 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm25384-201ENSMUST00000157807 105 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm23258-201ENSMUST00000158319 106 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm25121-201ENSMUST00000179846 79 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm27698-201ENSMUST00000184060 249 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm29602-201ENSMUST00000186887 442 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm37361-201ENSMUST00000194345 132 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm44524-201ENSMUST00000203899 271 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm44473-201ENSMUST00000204039 152 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Gm46997-201ENSMUST00000222108 217 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ushbp1Q8R370 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm22939-201ENSMUST00000103958 131 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm13355-201ENSMUST00000117996 317 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm22322-201ENSMUST00000157151 111 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm24787-201ENSMUST00000157380 123 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm22389-201ENSMUST00000158193 301 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm24005-201ENSMUST00000158459 296 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm42570-201ENSMUST00000195937 292 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm44960-201ENSMUST00000207403 141 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm45687-201ENSMUST00000209454 155 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Gm23727-201ENSMUST00000083352 164 ntBASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms