Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm46103-201ENSMUST00000217614 341 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Mir429-201ENSMUST00000083493 83 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm6664-201ENSMUST00000119138 468 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm25637-201ENSMUST00000157529 107 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm22611-201ENSMUST00000158288 150 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Mir6399-201ENSMUST00000184050 84 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm37576-201ENSMUST00000194228 372 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm44910-201ENSMUST00000208451 396 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Col6a6Q8C6K9 Gm12304-201ENSMUST00000120312 385 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Gm24846-201ENSMUST00000158033 108 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Gm20415-201ENSMUST00000172877 423 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Mir3057-201ENSMUST00000175040 91 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Mir7667-201ENSMUST00000183866 63 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Mir8106-201ENSMUST00000184520 139 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Gm42924-201ENSMUST00000197261 185 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Gm26175-201ENSMUST00000083794 131 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Snord35a-201ENSMUST00000083884 90 ntBASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Col6a6Q8C6K9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Snrpert-201ENSMUST00000121967 279 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Snord11-201ENSMUST00000158468 84 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm25718-201ENSMUST00000158632 118 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Mir7683-201ENSMUST00000183842 61 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm28688-201ENSMUST00000187301 268 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm43484-201ENSMUST00000198333 5966 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Mir574-201ENSMUST00000103854 78 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm26213-201ENSMUST00000158582 110 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm5329-201ENSMUST00000186898 463 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm44254-201ENSMUST00000204184 322 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.41□□□□□ -2.34
Col6a6Q8C6K9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm25423-201ENSMUST00000157609 107 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Mir6370-201ENSMUST00000183510 120 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm38323-201ENSMUST00000192450 210 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm44482-201ENSMUST00000199232 103 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm44564-201ENSMUST00000207985 180 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm11351-202ENSMUST00000225724 478 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm10038-201ENSMUST00000077233 441 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm26224-201ENSMUST00000082506 80 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Snord96a-201ENSMUST00000082791 81 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm23939-201ENSMUST00000082880 133 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm24928-201ENSMUST00000083399 107 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm25897-201ENSMUST00000083709 107 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm25411-201ENSMUST00000083760 151 ntBASIC0.4□□□□□ -2.34
Col6a6Q8C6K9 Gm12044-201ENSMUST00000120335 213 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Gm23429-201ENSMUST00000122486 149 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Gm45247-201ENSMUST00000210757 309 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Snora34-201ENSMUST00000083402 138 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.4□□□□□ -2.35
Col6a6Q8C6K9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm14669-201ENSMUST00000118841 250 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm24559-201ENSMUST00000157519 121 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm45387-201ENSMUST00000209792 632 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm22091-201ENSMUST00000116908 127 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm16431-201ENSMUST00000117454 431 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm11845-201ENSMUST00000117886 327 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm24915-201ENSMUST00000157288 78 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm24837-201ENSMUST00000158683 81 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Gm29950-201ENSMUST00000195273 237 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.39□□□□□ -2.35
Col6a6Q8C6K9 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms