Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm27828-201ENSMUST00000184108 119 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 AC124104.1-201ENSMUST00000226279 417 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm25142-201ENSMUST00000082698 107 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm23518-201ENSMUST00000082835 153 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim47Q8C0E3 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm10730-201ENSMUST00000194097 2723 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm26418-201ENSMUST00000104275 137 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm24982-201ENSMUST00000104456 132 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm14400-201ENSMUST00000117234 2135 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm22107-201ENSMUST00000122548 100 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm24014-201ENSMUST00000157728 157 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm24898-201ENSMUST00000158133 106 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm24634-201ENSMUST00000158672 107 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm37431-201ENSMUST00000195102 111 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm34139-201ENSMUST00000196166 294 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm19366-201ENSMUST00000206996 156 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim47Q8C0E3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm25765-201ENSMUST00000104100 132 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm23322-201ENSMUST00000104464 167 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm23652-201ENSMUST00000116752 107 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm9157-201ENSMUST00000117673 225 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm14402-201ENSMUST00000122217 508 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm43676-201ENSMUST00000197532 540 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm5175-202ENSMUST00000219699 529 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Mir30e-201ENSMUST00000083475 92 ntBASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Trim47Q8C0E3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.34□□□□□ -1.72
Trim47Q8C0E3 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.34□□□□□ -1.72
Trim47Q8C0E3 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm14518-201ENSMUST00000117351 542 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm26476-201ENSMUST00000122618 313 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm25436-201ENSMUST00000158275 145 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm26005-201ENSMUST00000158802 134 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm6625-201ENSMUST00000177870 272 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm28409-201ENSMUST00000187064 103 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm29408-201ENSMUST00000187536 216 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm45162-201ENSMUST00000209013 618 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm23244-201ENSMUST00000083375 92 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim47Q8C0E3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Snord64-201ENSMUST00000104003 67 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm26011-201ENSMUST00000104410 104 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm22679-201ENSMUST00000116975 100 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm11982-201ENSMUST00000121480 314 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm24440-201ENSMUST00000157236 63 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm24730-201ENSMUST00000158228 117 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm23112-201ENSMUST00000158606 125 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm24512-201ENSMUST00000174963 65 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm25464-201ENSMUST00000175481 107 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm27672-201ENSMUST00000183751 204 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm37791-201ENSMUST00000195081 286 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms