Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27544-201ENSMUST00000185069 155 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm18357-201ENSMUST00000188184 580 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Mir378a-201ENSMUST00000198300 66 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Gm24805-201ENSMUST00000082931 104 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Mir429-201ENSMUST00000083493 83 ntBASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Ccdc40Q8BI79 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm14674-201ENSMUST00000117816 342 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm22338-201ENSMUST00000157715 129 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm25384-201ENSMUST00000157807 105 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm24418-201ENSMUST00000177597 79 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm24639-201ENSMUST00000178518 79 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm23076-201ENSMUST00000179082 79 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm25077-201ENSMUST00000179157 79 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Mir7068-201ENSMUST00000183439 74 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Mir7021-201ENSMUST00000197026 63 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Gm44482-201ENSMUST00000199232 103 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Ccdc40Q8BI79 Mir873a-201ENSMUST00000104863 77 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm26424-201ENSMUST00000122530 104 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Trav20-201ENSMUST00000142754 347 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm24480-201ENSMUST00000157442 103 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm25956-201ENSMUST00000175115 217 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm25642-201ENSMUST00000175137 66 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Mir5118-201ENSMUST00000175551 67 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Mir691-201ENSMUST00000199719 78 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm42960-201ENSMUST00000202160 241 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm44830-201ENSMUST00000207667 584 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm40810-201ENSMUST00000219149 253 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm35558-203ENSMUST00000222264 204 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm25651-201ENSMUST00000083782 119 ntBASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ccdc40Q8BI79 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm22731-201ENSMUST00000158086 94 ntBASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm37923-201ENSMUST00000191624 161 ntBASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm37869-201ENSMUST00000193385 595 ntBASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Gm10360-201ENSMUST00000097219 272 ntBASIC1.92□□□□□ -2.1
Ccdc40Q8BI79 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm23000-201ENSMUST00000157083 139 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm23043-201ENSMUST00000157890 109 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm38261-201ENSMUST00000192608 316 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Gm44384-201ENSMUST00000200208 114 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc40Q8BI79 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.9□□□□□ -2.1
Ccdc40Q8BI79 Gm13433-201ENSMUST00000121701 240 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm25059-201ENSMUST00000157367 117 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm24222-201ENSMUST00000158834 93 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Mir6917-201ENSMUST00000184111 61 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm29134-201ENSMUST00000186579 126 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm28337-201ENSMUST00000190425 666 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm31123-201ENSMUST00000192094 666 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm44844-201ENSMUST00000207242 336 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Gm45375-201ENSMUST00000210338 280 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.9□□□□□ -2.11
Ccdc40Q8BI79 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm22217-201ENSMUST00000157556 313 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm22386-201ENSMUST00000158192 129 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm25035-201ENSMUST00000175414 77 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm38280-201ENSMUST00000192610 158 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Ear14-201ENSMUST00000049559 468 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm25589-201ENSMUST00000082502 166 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm25475-201ENSMUST00000082825 180 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 Gm22997-201ENSMUST00000082845 107 ntBASIC1.89□□□□□ -2.11
Ccdc40Q8BI79 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.88□□□□□ -2.11
Ccdc40Q8BI79 Gm25051-201ENSMUST00000158602 249 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms