Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm27761-201ENSMUST00000184091 131 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm5002-201ENSMUST00000207145 223 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm24966-201ENSMUST00000082443 79 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.99□□□□□ -1.77
Trim56Q80VI1 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim56Q80VI1 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm23532-201ENSMUST00000104569 112 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm6829-201ENSMUST00000119858 360 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm26020-201ENSMUST00000122729 183 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm22316-201ENSMUST00000158012 216 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm17166-201ENSMUST00000172006 431 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm28825-201ENSMUST00000186233 238 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm29104-201ENSMUST00000186304 222 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm23370-202ENSMUST00000197008 129 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm43193-201ENSMUST00000197732 441 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm43220-201ENSMUST00000199299 282 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm24204-201ENSMUST00000082950 107 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm26495-201ENSMUST00000083152 137 ntBASIC3.98□□□□□ -1.77
Trim56Q80VI1 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim56Q80VI1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim56Q80VI1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm22115-201ENSMUST00000103976 133 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm23923-201ENSMUST00000104108 133 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm12276-201ENSMUST00000121709 301 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm25914-201ENSMUST00000157618 153 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm17020-201ENSMUST00000172274 274 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm24167-201ENSMUST00000177733 124 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm24028-201ENSMUST00000178991 124 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Mir6371-201ENSMUST00000184470 111 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim56Q80VI1 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.97□□□□□ -1.77
Trim56Q80VI1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim56Q80VI1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim56Q80VI1 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.96□□□□□ -1.77
Trim56Q80VI1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Trim56Q80VI1 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm23013-201ENSMUST00000104146 106 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm25915-201ENSMUST00000104265 126 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm14803-201ENSMUST00000117163 361 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm22722-201ENSMUST00000157467 132 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm22833-201ENSMUST00000158292 132 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm27851-201ENSMUST00000183529 63 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm27285-201ENSMUST00000183875 127 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm27308-201ENSMUST00000184807 233 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm42774-201ENSMUST00000198854 283 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm20144-201ENSMUST00000203031 165 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm36776-201ENSMUST00000207006 203 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm6796-201ENSMUST00000211919 243 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm18000-201ENSMUST00000212153 800 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Gm25081-201ENSMUST00000082534 108 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim56Q80VI1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.96□□□□□ -1.78
Trim56Q80VI1 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim56Q80VI1 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Trim56Q80VI1 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Trim56Q80VI1 Gm26018-201ENSMUST00000104406 128 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim56Q80VI1 Gm23053-201ENSMUST00000175136 96 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Gm27220-201ENSMUST00000183453 262 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim56Q80VI1 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Gm46993-201ENSMUST00000220708 259 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Gm23462-201ENSMUST00000083264 104 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Mir208a-201ENSMUST00000083498 83 ntBASIC3.95□□□□□ -1.78
Trim56Q80VI1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim56Q80VI1 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim56Q80VI1 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm25421-201ENSMUST00000104218 164 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Mir1b-201ENSMUST00000117012 122 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm13761-201ENSMUST00000117238 807 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm25269-201ENSMUST00000122601 104 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm22767-201ENSMUST00000158365 165 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm24666-201ENSMUST00000158937 167 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm27580-201ENSMUST00000183666 149 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Gm45778-201ENSMUST00000211959 153 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms