Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm24594-201ENSMUST00000122502 99 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm24084-201ENSMUST00000175173 137 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm37449-201ENSMUST00000193016 270 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm18658-201ENSMUST00000195558 270 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm43427-201ENSMUST00000198188 331 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm9818-201ENSMUST00000050900 255 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm23517-201ENSMUST00000082830 192 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm23042-201ENSMUST00000083866 101 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shkbp1Q6P7W2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm22027-201ENSMUST00000122737 127 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm22321-201ENSMUST00000157152 104 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm25914-201ENSMUST00000157618 153 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm26171-201ENSMUST00000158422 131 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm38332-201ENSMUST00000194189 147 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm43749-201ENSMUST00000199345 352 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm43978-201ENSMUST00000203491 451 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm44703-201ENSMUST00000205724 248 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.36□□□□□ -1.87
Shkbp1Q6P7W2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm13504-201ENSMUST00000117490 316 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm15896-201ENSMUST00000118045 440 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm26001-201ENSMUST00000157989 103 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm22989-201ENSMUST00000158313 86 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm25071-201ENSMUST00000175232 70 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Mir6338-201ENSMUST00000183389 109 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm28755-201ENSMUST00000185773 199 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm37417-201ENSMUST00000195257 454 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm18188-201ENSMUST00000219386 478 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Gm25257-201ENSMUST00000083907 110 ntBASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shkbp1Q6P7W2 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm16021-201ENSMUST00000121176 219 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm15466-201ENSMUST00000122299 333 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm23982-201ENSMUST00000157141 106 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm23668-201ENSMUST00000157465 111 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm23641-201ENSMUST00000157857 101 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm26088-201ENSMUST00000157896 131 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm25863-201ENSMUST00000158249 329 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm25606-201ENSMUST00000158363 95 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm23702-201ENSMUST00000158840 130 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Mir5127-201ENSMUST00000175295 71 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm23152-201ENSMUST00000175322 116 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Gm26314-201ENSMUST00000083891 107 ntBASIC3.34□□□□□ -1.87
Shkbp1Q6P7W2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Shkbp1Q6P7W2 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.34□□□□□ -1.88
Shkbp1Q6P7W2 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.34□□□□□ -1.88
Shkbp1Q6P7W2 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm22939-201ENSMUST00000103958 131 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm24132-201ENSMUST00000104745 91 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm15223-201ENSMUST00000120989 826 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm22187-201ENSMUST00000157819 129 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm23380-201ENSMUST00000158448 103 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm20450-201ENSMUST00000173652 147 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm25615-201ENSMUST00000177836 94 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm26297-201ENSMUST00000179464 132 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm20144-201ENSMUST00000203031 165 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm5002-201ENSMUST00000207145 223 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms