Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25727-201ENSMUST00000104522 131 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm25572-201ENSMUST00000157527 172 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm23536-201ENSMUST00000157541 134 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22213-201ENSMUST00000157564 119 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm29308-201ENSMUST00000188863 315 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm28537-201ENSMUST00000189026 315 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm29631-201ENSMUST00000191065 315 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm5829-201ENSMUST00000191383 351 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm37239-201ENSMUST00000193510 141 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Trbv6-201ENSMUST00000193743 276 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm34779-201ENSMUST00000210036 263 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm22620-201ENSMUST00000082700 133 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm23443-201ENSMUST00000082916 128 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Mir30e-201ENSMUST00000083475 92 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Gm26166-201ENSMUST00000083788 107 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sh3rf1Q69ZI1 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25764-201ENSMUST00000104092 134 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm12458-201ENSMUST00000119387 495 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm13797-201ENSMUST00000121792 120 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25543-201ENSMUST00000122678 312 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23260-201ENSMUST00000158317 172 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Mir6385-201ENSMUST00000184295 105 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm37097-201ENSMUST00000193676 336 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm42988-201ENSMUST00000198116 225 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm45445-201ENSMUST00000209586 232 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm8508-201ENSMUST00000061226 363 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25895-201ENSMUST00000083714 100 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sh3rf1Q69ZI1 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22148-201ENSMUST00000104445 107 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Mir294-201ENSMUST00000104710 84 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm15936-201ENSMUST00000118706 460 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm11982-201ENSMUST00000121480 314 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23084-201ENSMUST00000157850 114 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm22775-201ENSMUST00000177630 120 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23569-201ENSMUST00000180120 120 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm17966-201ENSMUST00000193453 594 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm38238-201ENSMUST00000194334 346 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm44294-201ENSMUST00000205090 728 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Gm18015-201ENSMUST00000214879 316 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Mir193a-201ENSMUST00000083461 66 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Sh3rf1Q69ZI1 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm26081-201ENSMUST00000104068 132 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm11566-201ENSMUST00000118550 203 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm6762-201ENSMUST00000121769 289 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm25436-201ENSMUST00000158275 145 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm18429-201ENSMUST00000198707 421 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm3829-201ENSMUST00000222362 619 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm23264-201ENSMUST00000083372 107 ntBASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm13922-201ENSMUST00000119505 156 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 Gm24730-201ENSMUST00000158228 117 ntBASIC3.74□□□□□ -1.81
Sh3rf1Q69ZI1 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms