Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37732-201ENSMUST00000194377 316 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm43704-201ENSMUST00000196164 496 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm43749-201ENSMUST00000199345 352 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm44473-201ENSMUST00000204039 152 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm18453-201ENSMUST00000208000 626 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Gm45772-201ENSMUST00000212961 240 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Trim28Q62318 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.72□□□□□ -1.81
Trim28Q62318 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Trim28Q62318 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim28Q62318 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.71□□□□□ -1.81
Trim28Q62318 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.71□□□□□ -1.81
Trim28Q62318 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim28Q62318 Mir541-201ENSMUST00000102097 90 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm26186-201ENSMUST00000157689 125 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm22521-201ENSMUST00000158272 134 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim28Q62318 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim28Q62318 Gm28057-201ENSMUST00000186603 615 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm28896-201ENSMUST00000188609 696 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm28159-201ENSMUST00000190296 696 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm38107-201ENSMUST00000194873 696 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm6059-201ENSMUST00000196903 340 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim28Q62318 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim28Q62318 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Trim28Q62318 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Trim28Q62318 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim28Q62318 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim28Q62318 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trim28Q62318 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim28Q62318 Gm25500-201ENSMUST00000104426 123 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim28Q62318 Gm25321-201ENSMUST00000122558 102 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm25720-201ENSMUST00000157503 105 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm22516-201ENSMUST00000158266 124 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm23474-201ENSMUST00000158884 75 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm20534-201ENSMUST00000172957 172 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm22308-201ENSMUST00000177609 107 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Mir6346-201ENSMUST00000183982 81 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm29657-201ENSMUST00000189807 342 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Gm44922-201ENSMUST00000206690 90 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.7□□□□□ -1.82
Trim28Q62318 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.7□□□□□ -1.82
Trim28Q62318 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim28Q62318 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.7□□□□□ -1.82
Trim28Q62318 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim28Q62318 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Trim28Q62318 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim28Q62318 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm22389-201ENSMUST00000158193 301 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm27510-201ENSMUST00000158214 64 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm24876-201ENSMUST00000158780 92 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm24106-201ENSMUST00000175498 127 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim28Q62318 Mir3535-201ENSMUST00000197651 147 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.69□□□□□ -1.82
Trim28Q62318 Gm23625-201ENSMUST00000082457 100 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm26458-201ENSMUST00000082832 128 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Gm26204-201ENSMUST00000082906 107 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Mir471-201ENSMUST00000093596 67 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.69□□□□□ -1.82
Trim28Q62318 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trim28Q62318 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim28Q62318 Gm23128-201ENSMUST00000104257 132 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm25875-201ENSMUST00000104323 107 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim28Q62318 Gm14846-201ENSMUST00000121868 216 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm4916-201ENSMUST00000126139 642 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim28Q62318 Gm28020-201ENSMUST00000157739 67 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim28Q62318 Gm24487-201ENSMUST00000178017 63 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm24264-201ENSMUST00000179835 94 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm27545-201ENSMUST00000184755 202 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm23128-202ENSMUST00000196578 133 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm43529-201ENSMUST00000199178 412 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm44881-201ENSMUST00000205425 367 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Gm45296-201ENSMUST00000209625 205 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim28Q62318 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.68□□□□□ -1.82
Trim28Q62318 Snora70-201ENSMUST00000083047 137 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 333.8 ms