Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm14887-201ENSMUST00000119522 663 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm23829-201ENSMUST00000157392 270 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm15914-201ENSMUST00000161922 309 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm43529-201ENSMUST00000199178 412 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm44254-201ENSMUST00000204184 322 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm19032-201ENSMUST00000208584 592 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm18242-201ENSMUST00000218455 542 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Mir452-201ENSMUST00000093629 85 ntBASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.11□□□□□ -2.23
Trav2Q5R1I9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm22537-201ENSMUST00000158172 199 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm38231-201ENSMUST00000192030 347 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Mir1291-201ENSMUST00000199842 117 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm43004-201ENSMUST00000201872 703 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trav2Q5R1I9 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
Trav2Q5R1I9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Trav2Q5R1I9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm14793-201ENSMUST00000118739 311 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm24897-201ENSMUST00000179033 107 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm28439-201ENSMUST00000187714 876 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Snord14a-201ENSMUST00000082807 87 ntBASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Trav2Q5R1I9 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.09□□□□□ -2.24
Trav2Q5R1I9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trav2Q5R1I9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm24340-201ENSMUST00000104208 97 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm15861-201ENSMUST00000120979 339 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm17154-201ENSMUST00000165748 431 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm20543-201ENSMUST00000174200 726 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm21064-202ENSMUST00000190583 278 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm45590-201ENSMUST00000209715 262 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm2829-201ENSMUST00000213121 499 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Gm23462-201ENSMUST00000083264 104 ntBASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Trav2Q5R1I9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm25563-201ENSMUST00000104603 74 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm12417-201ENSMUST00000119153 403 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm12639-201ENSMUST00000121400 493 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Traj60-201ENSMUST00000167781 54 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm17054-201ENSMUST00000169811 259 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm9402-201ENSMUST00000196849 388 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm43723-201ENSMUST00000196886 189 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm29848-201ENSMUST00000203107 295 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm46993-201ENSMUST00000220708 259 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Gm26203-201ENSMUST00000082911 114 ntBASIC1.07□□□□□ -2.24
Trav2Q5R1I9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm22543-201ENSMUST00000104347 94 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm14013-201ENSMUST00000119006 270 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm16412-201ENSMUST00000121602 273 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm22076-201ENSMUST00000158601 84 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm10177-202ENSMUST00000161698 207 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm17164-201ENSMUST00000169013 506 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 Gm36984-201ENSMUST00000192770 235 ntBASIC1.06□□□□□ -2.24
Trav2Q5R1I9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms