Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.5□□□□□ -2.33
Trav6d-4Q5R1I0 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.5□□□□□ -2.33
Trav6d-4Q5R1I0 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
Trav6d-4Q5R1I0 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24342-201ENSMUST00000103907 104 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm13577-201ENSMUST00000121365 205 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm11389-201ENSMUST00000121407 430 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm23435-201ENSMUST00000157183 156 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24997-201ENSMUST00000157910 105 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Mir6419-201ENSMUST00000184784 113 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm44482-201ENSMUST00000199232 103 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm44548-201ENSMUST00000208929 192 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Gm45439-201ENSMUST00000211723 359 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Trav6d-4Q5R1I0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24592-201ENSMUST00000122505 106 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Mir7039-201ENSMUST00000183852 85 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm38060-201ENSMUST00000194822 464 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm18691-201ENSMUST00000203593 872 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm35736-201ENSMUST00000203681 313 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Mir221-201ENSMUST00000083488 95 ntBASIC0.48□□□□□ -2.33
Trav6d-4Q5R1I0 Gm12053-201ENSMUST00000119022 252 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm14980-201ENSMUST00000121247 736 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24851-201ENSMUST00000158028 103 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm22611-201ENSMUST00000158288 150 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm17052-201ENSMUST00000165496 289 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm22693-201ENSMUST00000175049 442 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm29005-201ENSMUST00000186773 320 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm38154-201ENSMUST00000195444 340 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm18039-201ENSMUST00000217816 728 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm24494-201ENSMUST00000083804 81 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm25257-201ENSMUST00000083907 110 ntBASIC0.47□□□□□ -2.33
Trav6d-4Q5R1I0 Gm15452-201ENSMUST00000119877 240 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm26038-201ENSMUST00000158151 106 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Atp2b4-208ENSMUST00000167348 243 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22929-201ENSMUST00000175517 107 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm21978-201ENSMUST00000179696 377 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm18356-201ENSMUST00000185677 623 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Mir3068-202ENSMUST00000197755 79 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm45907-201ENSMUST00000213023 193 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm2628-201ENSMUST00000218019 426 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 AC154603.1-201ENSMUST00000224355 313 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.46□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22785-201ENSMUST00000104087 132 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm13378-201ENSMUST00000117483 336 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm14716-201ENSMUST00000120138 718 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm21815-201ENSMUST00000178213 664 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Gm45530-201ENSMUST00000211658 225 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.45□□□□□ -2.34
Trav6d-4Q5R1I0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23202-201ENSMUST00000104376 129 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm13087-201ENSMUST00000118298 256 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm13992-201ENSMUST00000120558 156 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm24854-201ENSMUST00000158025 98 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Gm23208-201ENSMUST00000158666 127 ntBASIC0.44□□□□□ -2.34
Trav6d-4Q5R1I0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms