Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm22571-201ENSMUST00000082984 70 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm24316-201ENSMUST00000083041 107 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Mir208a-201ENSMUST00000083498 83 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Rnf180Q3U827 Mir127-201ENSMUST00000093568 70 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Rnf180Q3U827 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
Rnf180Q3U827 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Rnf180Q3U827 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm26387-201ENSMUST00000104238 132 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm22149-201ENSMUST00000104442 136 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm5396-201ENSMUST00000121222 532 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm14629-201ENSMUST00000122428 144 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm23671-201ENSMUST00000157472 103 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm25384-201ENSMUST00000157807 105 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm23196-201ENSMUST00000158806 107 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm36946-201ENSMUST00000192706 435 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm45296-201ENSMUST00000209625 205 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm23625-201ENSMUST00000082457 100 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm26497-201ENSMUST00000083146 107 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm26166-201ENSMUST00000083788 107 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.7□□□□□ -1.82
Rnf180Q3U827 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Rnf180Q3U827 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm15215-201ENSMUST00000117773 489 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm14774-201ENSMUST00000117857 536 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm24630-201ENSMUST00000122768 106 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm24075-201ENSMUST00000158175 72 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm22947-201ENSMUST00000158559 91 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Gm43704-201ENSMUST00000196164 496 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Rnf180Q3U827 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.69□□□□□ -1.82
Rnf180Q3U827 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Rnf180Q3U827 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm24338-201ENSMUST00000104205 127 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm23128-201ENSMUST00000104257 132 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm24079-201ENSMUST00000104352 132 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm12815-201ENSMUST00000121737 135 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm23670-201ENSMUST00000157469 119 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm17166-201ENSMUST00000172006 431 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Snora15-201ENSMUST00000177461 131 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm23128-202ENSMUST00000196578 133 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Mir7661-201ENSMUST00000197023 61 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm43239-201ENSMUST00000200131 201 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.68□□□□□ -1.82
Rnf180Q3U827 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm10088-201ENSMUST00000074116 423 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Gm25856-201ENSMUST00000082786 75 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Mir137-201ENSMUST00000083635 73 ntBASIC3.68□□□□□ -1.82
Rnf180Q3U827 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Rnf180Q3U827 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Rnf180Q3U827 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm15211-201ENSMUST00000118932 528 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm23232-201ENSMUST00000157300 105 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm27723-201ENSMUST00000157398 63 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm23641-201ENSMUST00000157857 101 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm17100-201ENSMUST00000168963 272 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf180Q3U827 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm23551-201ENSMUST00000116852 121 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm11819-201ENSMUST00000122192 372 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Rnf180Q3U827 Mir1942-201ENSMUST00000157274 63 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm24348-201ENSMUST00000158710 130 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm20718-201ENSMUST00000176058 259 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm27869-201ENSMUST00000184327 122 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm38060-201ENSMUST00000194822 464 ntBASIC3.66□□□□□ -1.82
Rnf180Q3U827 Gm43583-201ENSMUST00000199235 303 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms