Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 BC022960-201ENSMUST00000119987 1815 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm37479-201ENSMUST00000194169 3841 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm44076-201ENSMUST00000203072 520 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.3□□□□□ -1.72
Col17a1Q07563 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Gm23738-201ENSMUST00000082828 171 ntBASIC4.3□□□□□ -1.72
Col17a1Q07563 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col17a1Q07563 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Col17a1Q07563 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Col17a1Q07563 AC122828.3-201ENSMUST00000223019 3915 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col17a1Q07563 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col17a1Q07563 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm12213-201ENSMUST00000119924 353 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm26279-201ENSMUST00000157095 102 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm24213-201ENSMUST00000158255 258 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm17153-201ENSMUST00000171314 490 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm24304-201ENSMUST00000177635 107 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm37801-201ENSMUST00000194754 274 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.29□□□□□ -1.72
Col17a1Q07563 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Gm22577-201ENSMUST00000083731 109 ntBASIC4.29□□□□□ -1.72
Col17a1Q07563 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col17a1Q07563 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Mir541-201ENSMUST00000102097 90 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm14841-201ENSMUST00000121067 758 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm17065-201ENSMUST00000165245 239 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm28399-201ENSMUST00000186221 318 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm28572-201ENSMUST00000187444 318 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm37997-201ENSMUST00000193515 267 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm43901-201ENSMUST00000203247 453 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm44703-201ENSMUST00000205724 248 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.28□□□□□ -1.72
Col17a1Q07563 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col17a1Q07563 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col17a1Q07563 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col17a1Q07563 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC4.27□□□□□ -1.73
Col17a1Q07563 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col17a1Q07563 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm23142-201ENSMUST00000101848 105 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm26240-201ENSMUST00000101893 105 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm14880-201ENSMUST00000117581 292 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm27723-201ENSMUST00000157398 63 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm23078-201ENSMUST00000157848 148 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm16232-201ENSMUST00000162856 167 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm5002-201ENSMUST00000207145 223 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.27□□□□□ -1.73
Col17a1Q07563 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.27□□□□□ -1.73
Col17a1Q07563 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col17a1Q07563 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col17a1Q07563 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm14296-202ENSMUST00000108931 750 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm23990-201ENSMUST00000117031 117 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm14971-201ENSMUST00000117980 663 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm12417-201ENSMUST00000119153 403 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm6829-201ENSMUST00000119858 360 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm13868-201ENSMUST00000122411 294 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col17a1Q07563 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col17a1Q07563 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col17a1Q07563 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm26204-201ENSMUST00000082906 107 ntBASIC4.26□□□□□ -1.73
Col17a1Q07563 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col17a1Q07563 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col17a1Q07563 Gm25783-201ENSMUST00000122525 190 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm22026-201ENSMUST00000122735 281 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm26278-201ENSMUST00000157098 132 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm25044-201ENSMUST00000158603 104 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm24546-201ENSMUST00000158652 102 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm25361-201ENSMUST00000179358 76 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm24464-201ENSMUST00000179697 107 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm9818-201ENSMUST00000050900 255 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm23138-201ENSMUST00000083365 103 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm25207-201ENSMUST00000093745 107 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm45104-201ENSMUST00000208748 4350 ntBASIC4.25□□□□□ -1.73
Col17a1Q07563 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col17a1Q07563 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col17a1Q07563 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Col17a1Q07563 Gm43473-201ENSMUST00000200442 5997 ntBASIC4.24□□□□□ -1.73
Col17a1Q07563 Mir499-201ENSMUST00000102357 79 ntBASIC4.24□□□□□ -1.73
Col17a1Q07563 Gm13876-201ENSMUST00000118451 261 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms