Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm10242-201ENSMUST00000090064 330 ntBASIC4.43□□□□□ -1.7
Col9a1Q05722 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col9a1Q05722 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col9a1Q05722 Gm18751-201ENSMUST00000185777 2013 ntBASIC4.43□□□□□ -1.7
Col9a1Q05722 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col9a1Q05722 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm14299-201ENSMUST00000117586 397 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm14502-201ENSMUST00000118154 113 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm22380-201ENSMUST00000157479 95 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm23365-201ENSMUST00000175019 125 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm23638-201ENSMUST00000175073 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm23158-201ENSMUST00000175076 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm25960-201ENSMUST00000175110 125 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm44453-201ENSMUST00000175161 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm22907-201ENSMUST00000175198 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm22625-201ENSMUST00000175382 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm22875-201ENSMUST00000175449 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm27857-201ENSMUST00000176930 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm25195-201ENSMUST00000177656 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm26268-201ENSMUST00000177685 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm23681-201ENSMUST00000178821 126 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm21064-202ENSMUST00000190583 278 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm5829-201ENSMUST00000191383 351 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.42□□□□□ -1.7
Col9a1Q05722 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.42□□□□□ -1.7
Col9a1Q05722 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col9a1Q05722 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col9a1Q05722 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Col9a1Q05722 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col9a1Q05722 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col9a1Q05722 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm25595-201ENSMUST00000102273 97 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Mir466l-201ENSMUST00000104866 121 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm15365-201ENSMUST00000122392 300 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm24008-201ENSMUST00000157733 138 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm22382-201ENSMUST00000158185 130 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC4.41□□□□□ -1.7
Col9a1Q05722 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col9a1Q05722 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.41□□□□□ -1.7
Col9a1Q05722 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col9a1Q05722 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col9a1Q05722 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col9a1Q05722 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col9a1Q05722 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col9a1Q05722 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col9a1Q05722 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm14473-201ENSMUST00000122269 557 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm24595-201ENSMUST00000122501 110 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm23788-201ENSMUST00000122535 106 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm25323-201ENSMUST00000122555 103 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm24937-201ENSMUST00000122597 134 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm23665-201ENSMUST00000158054 62 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm22840-201ENSMUST00000158444 136 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col9a1Q05722 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm26493-201ENSMUST00000083155 136 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.4□□□□□ -1.71
Col9a1Q05722 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col9a1Q05722 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col9a1Q05722 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col9a1Q05722 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col9a1Q05722 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col9a1Q05722 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col9a1Q05722 Gm37063-201ENSMUST00000194678 3520 ntBASIC4.39□□□□□ -1.71
Col9a1Q05722 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Col9a1Q05722 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Col9a1Q05722 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col9a1Q05722 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.39□□□□□ -1.71
Col9a1Q05722 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms