Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Gm45662-201ENSMUST00000210054 2098 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Gm24263-201ENSMUST00000104059 107 ntBASIC4□□□□□ -1.77
Col6a1Q04857 n-R5s31-201ENSMUST00000104162 110 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm23530-201ENSMUST00000104564 137 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm13831-201ENSMUST00000118764 302 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm12071-201ENSMUST00000121968 469 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Gm23234-201ENSMUST00000157304 134 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Gm28848-201ENSMUST00000189984 168 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm19901-201ENSMUST00000192191 495 ntBASIC4□□□□□ -1.77
Col6a1Q04857 CT009604.2-201ENSMUST00000225531 377 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm23138-201ENSMUST00000083365 103 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Snord15a-201ENSMUST00000083888 148 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Gm44682-201ENSMUST00000208501 2614 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Gm37296-201ENSMUST00000192728 2922 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a1Q04857 Gm45264-201ENSMUST00000210090 3995 ntBASIC4□□□□□ -1.77
Col6a1Q04857 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a1Q04857 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a1Q04857 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm25421-201ENSMUST00000104218 164 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm12550-201ENSMUST00000118478 329 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm14748-201ENSMUST00000119819 411 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm5396-201ENSMUST00000121222 532 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm22988-201ENSMUST00000122759 144 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm26275-201ENSMUST00000157101 268 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm22011-201ENSMUST00000158790 123 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm26291-201ENSMUST00000158889 137 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm25935-201ENSMUST00000178746 107 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm26200-201ENSMUST00000180273 79 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.99□□□□□ -1.77
Col6a1Q04857 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.99□□□□□ -1.77
Col6a1Q04857 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm43932-201ENSMUST00000204499 52 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm5358-201ENSMUST00000212814 353 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Col6a1Q04857 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.99□□□□□ -1.77
Col6a1Q04857 Gm26027-201ENSMUST00000122725 268 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm24131-201ENSMUST00000158539 107 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Mir7118-201ENSMUST00000197760 61 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm45013-201ENSMUST00000206883 178 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm24356-201ENSMUST00000082859 106 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col6a1Q04857 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a1Q04857 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col6a1Q04857 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.98□□□□□ -1.77
Col6a1Q04857 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col6a1Q04857 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a1Q04857 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Mir872-201ENSMUST00000104728 81 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm25805-201ENSMUST00000122788 108 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm27761-201ENSMUST00000184091 131 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm44887-201ENSMUST00000208980 178 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm22304-201ENSMUST00000082688 129 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm23239-201ENSMUST00000083006 181 ntBASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a1Q04857 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a1Q04857 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col6a1Q04857 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col6a1Q04857 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Col6a1Q04857 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Col6a1Q04857 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.96□□□□□ -1.78
Col6a1Q04857 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col6a1Q04857 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm25308-201ENSMUST00000104171 158 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm24068-201ENSMUST00000104513 132 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm14518-201ENSMUST00000117351 542 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm13155-201ENSMUST00000119277 646 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm13443-201ENSMUST00000120770 555 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm8178-201ENSMUST00000121570 646 ntBASIC3.96□□□□□ -1.78
Col6a1Q04857 Gm22956-201ENSMUST00000122520 80 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms