Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm25451-201ENSMUST00000177832 121 ntBASIC1.36□□□□□ -2.19
Tpm1P58771 Mir6406-201ENSMUST00000183592 120 ntBASIC1.36□□□□□ -2.19
Tpm1P58771 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Tpm1P58771 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.36□□□□□ -2.19
Tpm1P58771 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.36□□□□□ -2.19
Tpm1P58771 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.36□□□□□ -2.19
Tpm1P58771 Gm22980-201ENSMUST00000082608 70 ntBASIC1.36□□□□□ -2.19
Tpm1P58771 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Tpm1P58771 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Tpm1P58771 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Tpm1P58771 Gm12639-201ENSMUST00000121400 493 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.35□□□□□ -2.19
Tpm1P58771 Gm24480-201ENSMUST00000157442 103 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Gm23339-201ENSMUST00000158962 139 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.35□□□□□ -2.19
Tpm1P58771 Traj60-201ENSMUST00000167781 54 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Tpm1P58771 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Tpm1P58771 Gm9022-202ENSMUST00000183285 483 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Mir6419-201ENSMUST00000184784 113 ntBASIC1.35□□□□□ -2.19
Tpm1P58771 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Tpm1P58771 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm12417-201ENSMUST00000119153 403 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm13368-201ENSMUST00000122443 430 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm24598-201ENSMUST00000122510 74 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm24851-201ENSMUST00000158028 103 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm22668-201ENSMUST00000158716 260 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.34□□□□□ -2.19
Tpm1P58771 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm42774-201ENSMUST00000198854 283 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm44954-201ENSMUST00000208513 227 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.34□□□□□ -2.19
Tpm1P58771 Gm25421-201ENSMUST00000104218 164 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Tpm1P58771 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Tpm1P58771 Gm15010-201ENSMUST00000117153 407 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm14972-201ENSMUST00000121780 364 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm24896-201ENSMUST00000122741 135 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Tpm1P58771 Gm23641-201ENSMUST00000157857 101 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm22944-201ENSMUST00000158662 133 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Tpm1P58771 Gm22633-201ENSMUST00000179834 107 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Tpm1P58771 Gm45907-201ENSMUST00000213023 193 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm18703-201ENSMUST00000215318 333 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm21937-201ENSMUST00000222825 218 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm22508-201ENSMUST00000082772 110 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Mir10a-201ENSMUST00000083585 110 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm25409-201ENSMUST00000083764 131 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Gm23503-201ENSMUST00000083903 107 ntBASIC1.33□□□□□ -2.2
Tpm1P58771 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Tpm1P58771 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.32□□□□□ -2.2
Tpm1P58771 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.32□□□□□ -2.2
Tpm1P58771 Gm13356-201ENSMUST00000121678 335 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm24892-201ENSMUST00000122747 104 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.32□□□□□ -2.2
Tpm1P58771 Gm23858-201ENSMUST00000158384 106 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Tpm1P58771 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.32□□□□□ -2.2
Tpm1P58771 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm38268-201ENSMUST00000195813 193 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm9402-201ENSMUST00000196849 388 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Tpm1P58771 Gm45344-201ENSMUST00000211610 341 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Tpm1P58771 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.32□□□□□ -2.2
Tpm1P58771 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm24045-201ENSMUST00000083113 98 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Gm23245-201ENSMUST00000083370 135 ntBASIC1.32□□□□□ -2.2
Tpm1P58771 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Tpm1P58771 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm14765-201ENSMUST00000121954 326 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm13409-201ENSMUST00000122072 546 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm25706-201ENSMUST00000157828 247 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm23090-201ENSMUST00000177331 78 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm23862-201ENSMUST00000180342 94 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Gm28956-201ENSMUST00000189047 427 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.31□□□□□ -2.2
Tpm1P58771 Gm45296-201ENSMUST00000209625 205 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.31□□□□□ -2.2
Tpm1P58771 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Tpm1P58771 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Tpm1P58771 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Tpm1P58771 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.3□□□□□ -2.2
Tpm1P58771 Gm25059-201ENSMUST00000157367 117 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm23331-201ENSMUST00000157423 108 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm24177-201ENSMUST00000158927 131 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm20613-201ENSMUST00000175828 345 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm24306-201ENSMUST00000180229 79 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Mir6355-201ENSMUST00000183687 106 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm37579-201ENSMUST00000194291 142 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm18546-201ENSMUST00000197245 676 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm31230-201ENSMUST00000199725 785 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.3□□□□□ -2.2
Tpm1P58771 Gm44655-201ENSMUST00000207768 423 ntBASIC1.3□□□□□ -2.2
Tpm1P58771 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms