Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22469-201ENSMUST00000104118 133 ntBASIC2.55□□□□□ -2
NcanP55066 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.55□□□□□ -2
NcanP55066 Gm11254-201ENSMUST00000122368 653 ntBASIC2.55□□□□□ -2
NcanP55066 Gm26277-201ENSMUST00000157097 152 ntBASIC2.55□□□□□ -2
NcanP55066 Gm26278-201ENSMUST00000157098 132 ntBASIC2.55□□□□□ -2
NcanP55066 Gm22136-201ENSMUST00000158751 268 ntBASIC2.55□□□□□ -2
NcanP55066 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.55□□□□□ -2
NcanP55066 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.55□□□□□ -2
NcanP55066 Gm27326-201ENSMUST00000183504 95 ntBASIC2.55□□□□□ -2
NcanP55066 Gm27894-201ENSMUST00000184177 92 ntBASIC2.55□□□□□ -2
NcanP55066 Gm38050-201ENSMUST00000191904 238 ntBASIC2.55□□□□□ -2
NcanP55066 Gm19777-201ENSMUST00000191940 358 ntBASIC2.55□□□□□ -2
NcanP55066 Gm18971-201ENSMUST00000197240 374 ntBASIC2.55□□□□□ -2
NcanP55066 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.55□□□□□ -2
NcanP55066 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.55□□□□□ -2
NcanP55066 Gm19252-201ENSMUST00000204705 305 ntBASIC2.55□□□□□ -2
NcanP55066 Gm45687-201ENSMUST00000209454 155 ntBASIC2.55□□□□□ -2
NcanP55066 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NcanP55066 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NcanP55066 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.55□□□□□ -2
NcanP55066 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.55□□□□□ -2
NcanP55066 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.55□□□□□ -2
NcanP55066 Mir10a-201ENSMUST00000083585 110 ntBASIC2.55□□□□□ -2
NcanP55066 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NcanP55066 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
NcanP55066 Gm25832-201ENSMUST00000104140 130 ntBASIC2.54□□□□□ -2
NcanP55066 Gm14670-201ENSMUST00000117327 337 ntBASIC2.54□□□□□ -2
NcanP55066 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.54□□□□□ -2
NcanP55066 Gm14629-201ENSMUST00000122428 144 ntBASIC2.54□□□□□ -2
NcanP55066 Gm25945-201ENSMUST00000122484 135 ntBASIC2.54□□□□□ -2
NcanP55066 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.54□□□□□ -2
NcanP55066 Gm22491-201ENSMUST00000157190 102 ntBASIC2.54□□□□□ -2
NcanP55066 Gm24771-201ENSMUST00000158508 137 ntBASIC2.54□□□□□ -2
NcanP55066 Gm7582-201ENSMUST00000160831 603 ntBASIC2.54□□□□□ -2
NcanP55066 Gm16111-201ENSMUST00000162128 285 ntBASIC2.54□□□□□ -2
NcanP55066 Gm17148-201ENSMUST00000164702 249 ntBASIC2.54□□□□□ -2
NcanP55066 Mir6951-201ENSMUST00000183910 75 ntBASIC2.54□□□□□ -2
NcanP55066 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.54□□□□□ -2
NcanP55066 Gm43529-201ENSMUST00000199178 412 ntBASIC2.54□□□□□ -2
NcanP55066 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.54□□□□□ -2
NcanP55066 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.54□□□□□ -2
NcanP55066 Gm23723-201ENSMUST00000082996 132 ntBASIC2.54□□□□□ -2
NcanP55066 Mir344-201ENSMUST00000083634 95 ntBASIC2.54□□□□□ -2
NcanP55066 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
NcanP55066 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
NcanP55066 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NcanP55066 Gm11065-201ENSMUST00000111462 228 ntBASIC2.53□□□□□ -2
NcanP55066 Gm12255-201ENSMUST00000117184 284 ntBASIC2.53□□□□□ -2
NcanP55066 Gm13806-201ENSMUST00000117822 325 ntBASIC2.53□□□□□ -2
NcanP55066 Gm14013-201ENSMUST00000119006 270 ntBASIC2.53□□□□□ -2
NcanP55066 Gm15379-201ENSMUST00000121224 648 ntBASIC2.53□□□□□ -2
NcanP55066 Gm26099-201ENSMUST00000157248 109 ntBASIC2.53□□□□□ -2
NcanP55066 Gm23024-201ENSMUST00000158770 292 ntBASIC2.53□□□□□ -2
NcanP55066 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.53□□□□□ -2
NcanP55066 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.53□□□□□ -2
NcanP55066 Gm26430-201ENSMUST00000178054 107 ntBASIC2.53□□□□□ -2
NcanP55066 Gm24862-201ENSMUST00000179103 79 ntBASIC2.53□□□□□ -2
NcanP55066 Gm23310-201ENSMUST00000179105 79 ntBASIC2.53□□□□□ -2
NcanP55066 Gm25461-201ENSMUST00000179293 79 ntBASIC2.53□□□□□ -2
NcanP55066 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.53□□□□□ -2
NcanP55066 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.53□□□□□ -2
NcanP55066 Gm18341-201ENSMUST00000197538 622 ntBASIC2.53□□□□□ -2
NcanP55066 Gm43083-201ENSMUST00000199594 476 ntBASIC2.53□□□□□ -2
NcanP55066 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.53□□□□□ -2
NcanP55066 Gm22806-201ENSMUST00000082738 136 ntBASIC2.53□□□□□ -2
NcanP55066 Gm26056-201ENSMUST00000083043 104 ntBASIC2.53□□□□□ -2
NcanP55066 Gm23970-201ENSMUST00000083319 107 ntBASIC2.53□□□□□ -2
NcanP55066 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NcanP55066 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NcanP55066 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.52□□□□□ -2.01
NcanP55066 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NcanP55066 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
NcanP55066 Gm14852-201ENSMUST00000120065 647 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm25335-201ENSMUST00000158043 103 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm24212-201ENSMUST00000158258 132 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm26406-201ENSMUST00000158503 124 ntBASIC2.52□□□□□ -2.01
NcanP55066 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
NcanP55066 Gm25470-201ENSMUST00000175576 111 ntBASIC2.52□□□□□ -2.01
NcanP55066 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm22131-201ENSMUST00000178415 94 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm28000-201ENSMUST00000184380 85 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm37054-201ENSMUST00000193481 543 ntBASIC2.52□□□□□ -2.01
NcanP55066 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm43976-201ENSMUST00000203637 235 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm44687-201ENSMUST00000204975 235 ntBASIC2.52□□□□□ -2.01
NcanP55066 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm44825-201ENSMUST00000207557 150 ntBASIC2.52□□□□□ -2.01
NcanP55066 Gm44598-201ENSMUST00000207566 150 ntBASIC2.52□□□□□ -2.01
NcanP55066 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.52□□□□□ -2.01
NcanP55066 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.52□□□□□ -2.01
NcanP55066 Gm20102-201ENSMUST00000222445 220 ntBASIC2.52□□□□□ -2.01
NcanP55066 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.52□□□□□ -2.01
NcanP55066 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NcanP55066 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NcanP55066 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NcanP55066 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.51□□□□□ -2.01
NcanP55066 Gm22891-201ENSMUST00000158641 164 ntBASIC2.51□□□□□ -2.01
NcanP55066 Gm16232-201ENSMUST00000162856 167 ntBASIC2.51□□□□□ -2.01
NcanP55066 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.51□□□□□ -2.01
NcanP55066 Gm38238-201ENSMUST00000194334 346 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms