Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.81□□□□□ -1.8
Hoxd9P28357 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Hoxd9P28357 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hoxd9P28357 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd9P28357 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm22816-201ENSMUST00000157450 117 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm23585-201ENSMUST00000157656 102 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm24745-201ENSMUST00000157840 85 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm25999-201ENSMUST00000175398 133 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm36964-201ENSMUST00000191876 198 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm42451-201ENSMUST00000197410 244 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm5175-202ENSMUST00000219699 529 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.8□□□□□ -1.8
Hoxd9P28357 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Mir34b-201ENSMUST00000083558 84 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Gm14400-201ENSMUST00000117234 2135 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd9P28357 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hoxd9P28357 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.8□□□□□ -1.8
Hoxd9P28357 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hoxd9P28357 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm26011-201ENSMUST00000104410 104 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm24067-201ENSMUST00000104514 85 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm24440-201ENSMUST00000157236 63 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm24850-201ENSMUST00000158029 119 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm24512-201ENSMUST00000174963 65 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm25464-201ENSMUST00000175481 107 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Mir6345-201ENSMUST00000184286 128 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm44343-201ENSMUST00000196702 90 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm43676-201ENSMUST00000197532 540 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.79□□□□□ -1.8
Hoxd9P28357 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hoxd9P28357 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm24281-201ENSMUST00000104234 136 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm24232-201ENSMUST00000104314 132 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm14518-201ENSMUST00000117351 542 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm12934-201ENSMUST00000119221 343 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm15861-201ENSMUST00000120979 339 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm7618-201ENSMUST00000121643 171 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm22986-201ENSMUST00000122753 130 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm22398-201ENSMUST00000174941 125 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm25731-201ENSMUST00000175167 125 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm28000-201ENSMUST00000184380 85 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm27952-201ENSMUST00000184748 105 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm10042-201ENSMUST00000079884 78 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm23244-201ENSMUST00000083375 92 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Gm24697-201ENSMUST00000083881 107 ntBASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Hoxd9P28357 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Hoxd9P28357 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm23063-201ENSMUST00000102350 93 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm24403-201ENSMUST00000104616 130 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm13268-201ENSMUST00000117485 433 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm6025-201ENSMUST00000121517 201 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm23655-201ENSMUST00000122627 105 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm25391-201ENSMUST00000157342 134 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm27672-201ENSMUST00000183751 204 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Mir6383-201ENSMUST00000184545 116 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm43680-201ENSMUST00000199466 340 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm24355-201ENSMUST00000082858 122 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm22055-201ENSMUST00000083388 107 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.77□□□□□ -1.81
Hoxd9P28357 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Hoxd9P28357 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Hoxd9P28357 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Hoxd9P28357 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms