Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.47□□□□□ -2.17
Sdc1P18828 Gm42570-201ENSMUST00000195937 292 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.47□□□□□ -2.17
Sdc1P18828 Gm44384-201ENSMUST00000200208 114 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Mir497-201ENSMUST00000200557 84 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.47□□□□□ -2.17
Sdc1P18828 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sdc1P18828 Gm25586-201ENSMUST00000082499 112 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Mir127-201ENSMUST00000093568 70 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm24817-201ENSMUST00000093672 105 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Sdc1P18828 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Sdc1P18828 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sdc1P18828 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sdc1P18828 Gm23889-201ENSMUST00000122689 104 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm25333-201ENSMUST00000158035 246 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm25956-201ENSMUST00000175115 217 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm20613-201ENSMUST00000175828 345 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Mir7241-201ENSMUST00000184532 64 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm27624-201ENSMUST00000185047 177 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Sdc1P18828 Gm29350-201ENSMUST00000189141 541 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm38261-201ENSMUST00000192608 316 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm43582-201ENSMUST00000196149 343 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Mir7021-201ENSMUST00000197026 63 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm7946-201ENSMUST00000203326 958 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm44142-201ENSMUST00000203358 311 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm40810-201ENSMUST00000219149 253 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Ear14-201ENSMUST00000049559 468 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sdc1P18828 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.46□□□□□ -2.18
Sdc1P18828 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Sdc1P18828 Gm24079-201ENSMUST00000104352 132 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm13672-201ENSMUST00000117554 459 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm24598-201ENSMUST00000122510 74 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm25384-201ENSMUST00000157807 105 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm22328-201ENSMUST00000158074 112 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm24075-201ENSMUST00000158175 72 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.45□□□□□ -2.18
Sdc1P18828 Gm20477-201ENSMUST00000174028 280 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm23860-201ENSMUST00000179446 132 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Mir7683-201ENSMUST00000183842 61 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm27369-201ENSMUST00000185182 71 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm28740-201ENSMUST00000186142 215 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.45□□□□□ -2.18
Sdc1P18828 Gm37550-201ENSMUST00000193230 463 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm42857-201ENSMUST00000200823 339 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm44256-201ENSMUST00000203304 335 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm44336-201ENSMUST00000203696 468 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm44830-201ENSMUST00000207667 584 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm45365-201ENSMUST00000209489 256 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.45□□□□□ -2.18
Sdc1P18828 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.45□□□□□ -2.18
Sdc1P18828 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Sdc1P18828 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Sdc1P18828 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Sdc1P18828 Gm23448-201ENSMUST00000083151 104 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Gm23100-201ENSMUST00000083455 141 ntBASIC1.45□□□□□ -2.18
Sdc1P18828 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Sdc1P18828 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Mir743b-201ENSMUST00000104751 77 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm14823-201ENSMUST00000117698 238 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm16242-201ENSMUST00000117741 334 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm13581-201ENSMUST00000120675 278 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Sdc1P18828 Gm24084-201ENSMUST00000175173 137 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm25730-201ENSMUST00000178753 165 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Mir6351-201ENSMUST00000183826 99 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm29352-201ENSMUST00000188054 544 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm44446-201ENSMUST00000204864 255 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.44□□□□□ -2.18
Sdc1P18828 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.44□□□□□ -2.18
Sdc1P18828 Gm25102-201ENSMUST00000122479 112 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm24596-201ENSMUST00000122504 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm16328-201ENSMUST00000126985 196 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.43□□□□□ -2.18
Sdc1P18828 Gm26278-201ENSMUST00000157098 132 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm24584-201ENSMUST00000157972 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm23858-201ENSMUST00000158384 106 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm26214-201ENSMUST00000158581 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm25035-201ENSMUST00000175414 77 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm25211-201ENSMUST00000177553 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm24540-201ENSMUST00000177627 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm25256-201ENSMUST00000177746 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Sdc1P18828 Gm22822-201ENSMUST00000177941 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Rnu6-201ENSMUST00000178023 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm23151-201ENSMUST00000178061 107 ntBASIC1.43□□□□□ -2.18
Sdc1P18828 Gm25245-201ENSMUST00000178139 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 335.1 ms