Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Gm24268-201ENSMUST00000082990 110 ntBASIC2.05□□□□□ -2.08
Lire1P11260 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Lire1P11260 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lire1P11260 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm15010-201ENSMUST00000117153 407 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm23048-201ENSMUST00000157237 129 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm23641-201ENSMUST00000157857 101 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm22803-201ENSMUST00000158049 283 ntBASIC2.04□□□□□ -2.08
Lire1P11260 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.04□□□□□ -2.08
Lire1P11260 Gm38041-201ENSMUST00000194445 661 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.04□□□□□ -2.08
Lire1P11260 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Gm40810-201ENSMUST00000219149 253 ntBASIC2.04□□□□□ -2.08
Lire1P11260 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Lire1P11260 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.04□□□□□ -2.08
Lire1P11260 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Lire1P11260 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Lire1P11260 Gm14709-201ENSMUST00000121225 304 ntBASIC2.03□□□□□ -2.08
Lire1P11260 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Gm22217-201ENSMUST00000157556 313 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Gm22082-201ENSMUST00000157587 161 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Gm24769-201ENSMUST00000158506 129 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.03□□□□□ -2.08
Lire1P11260 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Lire1P11260 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Lire1P11260 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.03□□□□□ -2.08
Lire1P11260 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Lire1P11260 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.02□□□□□ -2.09
Lire1P11260 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.02□□□□□ -2.09
Lire1P11260 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.02□□□□□ -2.09
Lire1P11260 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Lire1P11260 Gm25059-201ENSMUST00000157367 117 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm16561-201ENSMUST00000163001 192 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm20613-201ENSMUST00000175828 345 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Lire1P11260 Gm22631-201ENSMUST00000179656 94 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lire1P11260 Mir496b-201ENSMUST00000184935 113 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm18453-201ENSMUST00000208000 626 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.02□□□□□ -2.09
Lire1P11260 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm22997-201ENSMUST00000082845 107 ntBASIC2.02□□□□□ -2.09
Lire1P11260 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.02□□□□□ -2.09
Lire1P11260 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lire1P11260 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lire1P11260 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Lire1P11260 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Lire1P11260 Gm14678-201ENSMUST00000121396 482 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Gm25910-201ENSMUST00000157620 140 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Lire1P11260 Gm25730-201ENSMUST00000178753 165 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Gm37923-201ENSMUST00000191624 161 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Lire1P11260 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.01□□□□□ -2.09
Lire1P11260 Gm25853-201ENSMUST00000082793 132 ntBASIC2.01□□□□□ -2.09
Lire1P11260 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Lire1P11260 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2□□□□□ -2.09
Lire1P11260 Gm20477-201ENSMUST00000174028 280 ntBASIC2□□□□□ -2.09
Lire1P11260 Mir6997-201ENSMUST00000184313 71 ntBASIC2□□□□□ -2.09
Lire1P11260 Gm37550-201ENSMUST00000193230 463 ntBASIC2□□□□□ -2.09
Lire1P11260 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2□□□□□ -2.09
Lire1P11260 Mir7021-201ENSMUST00000197026 63 ntBASIC2□□□□□ -2.09
Lire1P11260 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2□□□□□ -2.09
Lire1P11260 Mir691-201ENSMUST00000199719 78 ntBASIC2□□□□□ -2.09
Lire1P11260 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2□□□□□ -2.09
Lire1P11260 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2□□□□□ -2.09
Lire1P11260 AC101945.1-201ENSMUST00000226734 466 ntBASIC2□□□□□ -2.09
Lire1P11260 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2□□□□□ -2.09
Lire1P11260 Gm25589-201ENSMUST00000082502 166 ntBASIC2□□□□□ -2.09
Lire1P11260 Gm22806-201ENSMUST00000082738 136 ntBASIC2□□□□□ -2.09
Lire1P11260 Gm23100-201ENSMUST00000083455 141 ntBASIC2□□□□□ -2.09
Lire1P11260 Snora69-201ENSMUST00000083708 131 ntBASIC2□□□□□ -2.09
Lire1P11260 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Lire1P11260 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Lire1P11260 Gm23472-201ENSMUST00000101806 191 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.99□□□□□ -2.09
Lire1P11260 Gm25333-201ENSMUST00000158035 246 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm23548-201ENSMUST00000158963 106 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm16326-201ENSMUST00000162843 414 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.99□□□□□ -2.09
Lire1P11260 Gm24497-201ENSMUST00000177868 191 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm25939-201ENSMUST00000179876 191 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Mir7241-201ENSMUST00000184532 64 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.99□□□□□ -2.09
Lire1P11260 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.99□□□□□ -2.09
Lire1P11260 Mir497-201ENSMUST00000200557 84 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm23444-201ENSMUST00000082922 191 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm22572-201ENSMUST00000082985 105 ntBASIC1.99□□□□□ -2.09
Lire1P11260 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Lire1P11260 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.98□□□□□ -2.09
Lire1P11260 Gm23950-201ENSMUST00000104026 129 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms