Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col1a1P11087 Gm15211-201ENSMUST00000118932 528 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm12417-201ENSMUST00000119153 403 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.73□□□□□ -2.29
Col1a1P11087 Mir1967-201ENSMUST00000157789 82 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm22098-201ENSMUST00000157930 85 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm22074-201ENSMUST00000158595 113 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm25838-201ENSMUST00000158920 120 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.73□□□□□ -2.29
Col1a1P11087 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm24208-201ENSMUST00000082783 135 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Snord118-201ENSMUST00000082965 135 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm24582-201ENSMUST00000103967 103 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm23531-201ENSMUST00000104567 68 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm11065-201ENSMUST00000111462 228 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm12636-201ENSMUST00000117395 624 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm6664-201ENSMUST00000119138 468 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm24229-201ENSMUST00000158830 118 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm27028-201ENSMUST00000182303 399 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm27974-201ENSMUST00000183415 105 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Col1a1P11087 Gm37002-201ENSMUST00000194560 373 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm43199-201ENSMUST00000200019 307 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.73□□□□□ -2.29
Col1a1P11087 Gm29754-201ENSMUST00000206269 358 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm44865-201ENSMUST00000207240 531 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Gm22265-201ENSMUST00000082947 116 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.73□□□□□ -2.29
Col1a1P11087 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Col1a1P11087 Gm24793-201ENSMUST00000104289 132 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm22425-201ENSMUST00000158532 138 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Mir3057-201ENSMUST00000175040 91 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm21758-201ENSMUST00000179336 819 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm29647-201ENSMUST00000188795 666 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm20832-201ENSMUST00000189076 665 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm28241-201ENSMUST00000190916 235 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm28504-201ENSMUST00000190977 666 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.72□□□□□ -2.29
Col1a1P11087 Gm18296-201ENSMUST00000192475 783 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm35843-201ENSMUST00000193716 666 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm36728-201ENSMUST00000195782 665 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Col1a1P11087 Gm45530-201ENSMUST00000211658 225 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.72□□□□□ -2.29
Col1a1P11087 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Col1a1P11087 Gm381-201ENSMUST00000117443 2037 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Col1a1P11087 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Col1a1P11087 Gm12507-201ENSMUST00000119155 415 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm23752-201ENSMUST00000157584 115 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm22611-201ENSMUST00000158288 150 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28838-201ENSMUST00000186338 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm29635-201ENSMUST00000187221 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm29026-201ENSMUST00000187787 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28797-201ENSMUST00000188543 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28855-201ENSMUST00000188680 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28705-201ENSMUST00000189548 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28939-201ENSMUST00000190351 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm28223-201ENSMUST00000190469 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm29092-201ENSMUST00000190768 315 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm37743-201ENSMUST00000194645 376 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm42623-201ENSMUST00000197225 379 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm35736-201ENSMUST00000203681 313 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.71□□□□□ -2.3
Col1a1P11087 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
Col1a1P11087 Gm22997-201ENSMUST00000082845 107 ntBASIC0.71□□□□□ -2.3
Col1a1P11087 Gm7429-201ENSMUST00000118664 348 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm26349-201ENSMUST00000157530 130 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm20477-201ENSMUST00000174028 280 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm18397-201ENSMUST00000176704 587 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm26378-201ENSMUST00000179093 107 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm29460-201ENSMUST00000188607 714 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.7□□□□□ -2.3
Col1a1P11087 Gm23691-201ENSMUST00000101878 107 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm14915-201ENSMUST00000120747 204 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm22452-201ENSMUST00000122804 104 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm23170-201ENSMUST00000157158 106 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm24915-201ENSMUST00000157288 78 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm22338-201ENSMUST00000157715 129 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm26236-201ENSMUST00000175536 137 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm21744-201ENSMUST00000178403 662 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm24100-201ENSMUST00000178592 79 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm26189-201ENSMUST00000179879 107 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm29413-201ENSMUST00000186019 880 ntBASIC0.69□□□□□ -2.3
Col1a1P11087 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Col1a1P11087 Gm28700-201ENSMUST00000187614 579 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms