| Hoxa4 | P06798 | CT025619.4-201 | ENSMUST00000217362 | 350 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | AC167140.1-201 | ENSMUST00000224710 | 403 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm10226-201 | ENSMUST00000072133 | 255 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Rpl30-ps8-201 | ENSMUST00000076166 | 345 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm6185-201 | ENSMUST00000193379 | 3553 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Trbj1-4-201 | ENSMUST00000103287 | 51 nt | APPRIS P1 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23951-201 | ENSMUST00000104029 | 132 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Vmn1r-ps125-201 | ENSMUST00000117767 | 290 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm14652-201 | ENSMUST00000118479 | 235 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm13903-201 | ENSMUST00000120945 | 193 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm11384-201 | ENSMUST00000121376 | 303 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | n-R5s164-201 | ENSMUST00000122664 | 112 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm6956-201 | ENSMUST00000134724 | 546 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25486-201 | ENSMUST00000158726 | 63 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm17072-201 | ENSMUST00000166673 | 658 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm8207-201 | ENSMUST00000171204 | 502 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Mir5136-201 | ENSMUST00000175573 | 76 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Mir3569-201 | ENSMUST00000185080 | 58 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm27369-201 | ENSMUST00000185182 | 71 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm3952-201 | ENSMUST00000195093 | 573 nt | APPRIS P1 TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm44409-201 | ENSMUST00000198810 | 166 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22806-201 | ENSMUST00000082738 | 136 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25698-201 | ENSMUST00000082897 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22353-201 | ENSMUST00000083918 | 136 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr722-201 | ENSMUST00000053290 | 1582 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | CT030170.3-201 | ENSMUST00000221205 | 1815 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Cyp3a59-201 | ENSMUST00000035571 | 1990 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr868-202 | ENSMUST00000212999 | 4233 nt | APPRIS P1 TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Skint6-202 | ENSMUST00000171224 | 3723 nt | APPRIS P1 TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm17969-201 | ENSMUST00000185706 | 2557 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm44821-201 | ENSMUST00000208212 | 2002 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Ighv9-3-201 | ENSMUST00000103473 | 351 nt | APPRIS P1 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm13343-201 | ENSMUST00000116474 | 105 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm11460-201 | ENSMUST00000118200 | 361 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | n-R5s191-201 | ENSMUST00000122724 | 116 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm12238-201 | ENSMUST00000127764 | 124 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Cdrt4os2-201 | ENSMUST00000128675 | 494 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm12865-201 | ENSMUST00000137353 | 326 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm16358-201 | ENSMUST00000146046 | 210 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25220-201 | ENSMUST00000157546 | 95 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23779-201 | ENSMUST00000157938 | 64 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25902-201 | ENSMUST00000158493 | 318 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24552-201 | ENSMUST00000158646 | 103 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm29352-201 | ENSMUST00000188054 | 544 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm37281-201 | ENSMUST00000192412 | 439 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Mir6375-201 | ENSMUST00000197176 | 95 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr277-ps1-201 | ENSMUST00000205749 | 285 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr468-ps1-201 | ENSMUST00000207203 | 593 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm9377-201 | ENSMUST00000207227 | 623 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | 1700030L22Rik-201 | ENSMUST00000221214 | 567 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | AC166341.3-201 | ENSMUST00000221861 | 114 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | AC157352.1-201 | ENSMUST00000222762 | 303 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | AC154552.1-201 | ENSMUST00000222969 | 202 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23406-201 | ENSMUST00000082537 | 122 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24948-201 | ENSMUST00000082866 | 207 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24522-201 | ENSMUST00000083964 | 108 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr847-202 | ENSMUST00000216839 | 2385 nt | APPRIS P1 TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm13212-202 | ENSMUST00000105739 | 3595 nt | APPRIS P1 TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm8300-201 | ENSMUST00000110152 | 1873 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | C030005K15Rik-201 | ENSMUST00000166373 | 1882 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Olfr794-202 | ENSMUST00000204820 | 3044 nt | APPRIS P1 TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | 4921511C20Rik-201 | ENSMUST00000051530 | 1606 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm10563-201 | ENSMUST00000115821 | 237 nt | APPRIS P1 TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Snord98-201 | ENSMUST00000116819 | 65 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm14287-201 | ENSMUST00000121060 | 117 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24596-201 | ENSMUST00000122504 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23887-201 | ENSMUST00000122683 | 172 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23137-201 | ENSMUST00000157559 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22551-201 | ENSMUST00000157795 | 103 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24584-201 | ENSMUST00000157972 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23542-201 | ENSMUST00000158208 | 96 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | 4930518C09Rik-201 | ENSMUST00000172700 | 478 nt | TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25211-201 | ENSMUST00000177553 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24540-201 | ENSMUST00000177627 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25256-201 | ENSMUST00000177746 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22822-201 | ENSMUST00000177941 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Rnu6-201 | ENSMUST00000178023 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23151-201 | ENSMUST00000178061 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25245-201 | ENSMUST00000178139 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24753-201 | ENSMUST00000178183 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25829-201 | ENSMUST00000178275 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22092-201 | ENSMUST00000178290 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24486-201 | ENSMUST00000178420 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23217-201 | ENSMUST00000178482 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm26245-201 | ENSMUST00000178491 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23610-201 | ENSMUST00000178659 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23092-201 | ENSMUST00000178688 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25709-201 | ENSMUST00000178844 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25547-201 | ENSMUST00000178877 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25312-201 | ENSMUST00000178972 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24722-201 | ENSMUST00000179017 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22969-201 | ENSMUST00000179018 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25101-201 | ENSMUST00000179057 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm26378-201 | ENSMUST00000179093 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24873-201 | ENSMUST00000179101 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm23934-201 | ENSMUST00000179111 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22623-201 | ENSMUST00000179244 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm25737-201 | ENSMUST00000179274 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm22618-201 | ENSMUST00000179376 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hoxa4 | P06798 | Gm24182-201 | ENSMUST00000179419 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |