Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm23060-201ENSMUST00000102345 109 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cldn1O88551 Mir743b-201ENSMUST00000104751 77 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Cldn1O88551 Gm23109-201ENSMUST00000116867 126 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm14770-201ENSMUST00000122197 312 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm25325-201ENSMUST00000122559 86 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm25961-201ENSMUST00000157174 135 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm22382-201ENSMUST00000158185 130 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm24769-201ENSMUST00000158506 129 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cldn1O88551 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm25314-201ENSMUST00000178810 79 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm28825-201ENSMUST00000186233 238 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm29134-201ENSMUST00000186579 126 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm28337-201ENSMUST00000190425 666 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm9402-201ENSMUST00000196849 388 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.87□□□□□ -2.11
Cldn1O88551 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.87□□□□□ -2.11
Cldn1O88551 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.87□□□□□ -2.11
Cldn1O88551 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Cldn1O88551 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Cldn1O88551 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Cldn1O88551 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cldn1O88551 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cldn1O88551 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cldn1O88551 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm12872-201ENSMUST00000121835 320 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm24010-201ENSMUST00000157731 282 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm22554-201ENSMUST00000157798 147 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm23641-201ENSMUST00000157857 101 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm23043-201ENSMUST00000157890 109 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm25335-201ENSMUST00000158043 103 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm24394-201ENSMUST00000158141 123 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm27317-201ENSMUST00000183533 95 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm37557-201ENSMUST00000191640 139 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm5034-201ENSMUST00000199115 634 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm44465-201ENSMUST00000199536 114 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Mir7217-201ENSMUST00000200304 62 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm45402-201ENSMUST00000211796 223 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.86□□□□□ -2.11
Cldn1O88551 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.85□□□□□ -2.11
Cldn1O88551 Gm16242-201ENSMUST00000117741 334 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm15896-201ENSMUST00000118045 440 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm23324-201ENSMUST00000157421 131 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm22083-201ENSMUST00000157586 102 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm24409-201ENSMUST00000157881 152 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm22328-201ENSMUST00000158074 112 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm23016-201ENSMUST00000158431 62 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm23714-201ENSMUST00000179259 105 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cldn1O88551 Gm37361-201ENSMUST00000194345 132 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm6059-201ENSMUST00000196903 340 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cldn1O88551 Gm44446-201ENSMUST00000204864 255 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm44870-201ENSMUST00000207291 357 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.85□□□□□ -2.11
Cldn1O88551 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.85□□□□□ -2.11
Cldn1O88551 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Cldn1O88551 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.85□□□□□ -2.11
Cldn1O88551 Gm7065-201ENSMUST00000222150 474 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm20102-201ENSMUST00000222445 220 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm22620-201ENSMUST00000082700 133 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm25628-201ENSMUST00000084002 105 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Gm3867-201ENSMUST00000086108 279 ntBASIC1.85□□□□□ -2.11
Cldn1O88551 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cldn1O88551 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cldn1O88551 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cldn1O88551 Gm14355-201ENSMUST00000117352 264 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm15844-201ENSMUST00000118016 576 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm14652-201ENSMUST00000118479 235 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm14748-201ENSMUST00000119819 411 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm13903-201ENSMUST00000120945 193 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm24846-201ENSMUST00000158033 108 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.84□□□□□ -2.11
Cldn1O88551 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.84□□□□□ -2.11
Cldn1O88551 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.84□□□□□ -2.11
Cldn1O88551 Gm33354-201ENSMUST00000195448 906 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm43978-201ENSMUST00000203491 451 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm24313-201ENSMUST00000082561 133 ntBASIC1.84□□□□□ -2.11
Cldn1O88551 Gm24044-201ENSMUST00000083107 156 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms