Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm14530-201ENSMUST00000122391 333 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm25621-201ENSMUST00000157223 114 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm24724-201ENSMUST00000158230 107 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm17119-201ENSMUST00000163943 280 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm20794-201ENSMUST00000177626 628 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.49□□□□□ -2.17
Col5a1O88207 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.49□□□□□ -2.17
Col5a1O88207 Gm29429-201ENSMUST00000187071 121 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm28661-201ENSMUST00000188231 681 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm29740-201ENSMUST00000193182 655 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.49□□□□□ -2.17
Col5a1O88207 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Col5a1O88207 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Gm25755-201ENSMUST00000083396 107 ntBASIC1.49□□□□□ -2.17
Col5a1O88207 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Col5a1O88207 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Col5a1O88207 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm12765-201ENSMUST00000117273 615 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm14307-201ENSMUST00000118930 291 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm14392-201ENSMUST00000120332 401 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm23886-201ENSMUST00000122684 313 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm14297-201ENSMUST00000129110 291 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.48□□□□□ -2.17
Col5a1O88207 Gm24439-201ENSMUST00000157894 117 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm23415-201ENSMUST00000175519 83 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm22290-201ENSMUST00000177655 107 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm22583-201ENSMUST00000178031 107 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm23523-201ENSMUST00000180190 107 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm25284-201ENSMUST00000180345 141 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm27490-201ENSMUST00000184754 128 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm19089-201ENSMUST00000197207 613 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm44391-201ENSMUST00000198490 93 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm44961-201ENSMUST00000207450 196 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.48□□□□□ -2.17
Col5a1O88207 Gm19140-201ENSMUST00000209790 421 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm46193-201ENSMUST00000219399 364 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col5a1O88207 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col5a1O88207 Gm24765-201ENSMUST00000083691 103 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Col5a1O88207 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Col5a1O88207 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.48□□□□□ -2.17
Col5a1O88207 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col5a1O88207 Gm13331-201ENSMUST00000117500 448 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm15896-201ENSMUST00000118045 440 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm13273-201ENSMUST00000119737 159 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm14287-201ENSMUST00000121060 117 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm14694-201ENSMUST00000121856 282 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm13368-201ENSMUST00000122443 430 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm23329-201ENSMUST00000157415 108 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm17162-201ENSMUST00000168538 473 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col5a1O88207 Gm37743-201ENSMUST00000194645 376 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm10264-201ENSMUST00000220589 429 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.47□□□□□ -2.17
Col5a1O88207 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Ear14-201ENSMUST00000049559 468 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm23645-201ENSMUST00000083228 108 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm3867-201ENSMUST00000086108 279 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col5a1O88207 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Col5a1O88207 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Col5a1O88207 Gm24590-201ENSMUST00000116699 119 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm14558-201ENSMUST00000117458 381 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm13510-201ENSMUST00000118659 429 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm14765-201ENSMUST00000121954 326 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.47□□□□□ -2.17
Col5a1O88207 Gm23000-201ENSMUST00000157083 139 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm26348-201ENSMUST00000157528 240 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm22434-201ENSMUST00000158549 122 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Col5a1O88207 Mir3964-201ENSMUST00000174898 74 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Mir5099-201ENSMUST00000175257 74 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm27599-201ENSMUST00000183758 174 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Mir7093-201ENSMUST00000184195 101 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm27385-201ENSMUST00000184747 104 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Mir6372-201ENSMUST00000185114 109 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm29134-201ENSMUST00000186579 126 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm28506-201ENSMUST00000189937 150 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm28951-201ENSMUST00000190742 313 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm28241-201ENSMUST00000190916 235 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm32033-201ENSMUST00000193483 339 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm42924-201ENSMUST00000197261 185 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm19147-201ENSMUST00000199622 652 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.47□□□□□ -2.17
Col5a1O88207 Gm18696-201ENSMUST00000220103 274 ntBASIC1.47□□□□□ -2.17
Col5a1O88207 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms