Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm25793-201ENSMUST00000083287 107 ntBASIC2.72□□□□□ -1.97
Cbx4O55187 Gm26329-201ENSMUST00000093723 110 ntBASIC2.72□□□□□ -1.97
Cbx4O55187 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Cbx4O55187 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cbx4O55187 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Cbx4O55187 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Cbx4O55187 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Cbx4O55187 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Cbx4O55187 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Cbx4O55187 Gm15183-201ENSMUST00000118933 348 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm11904-201ENSMUST00000120562 248 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm24487-201ENSMUST00000178017 63 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm28951-201ENSMUST00000190742 313 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm37162-201ENSMUST00000191708 551 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm43510-201ENSMUST00000197922 353 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm44960-201ENSMUST00000207403 141 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.71□□□□□ -1.98
Cbx4O55187 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.71□□□□□ -1.98
Cbx4O55187 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Cbx4O55187 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Cbx4O55187 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Cbx4O55187 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.71□□□□□ -1.98
Cbx4O55187 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Cbx4O55187 Gm13210-201ENSMUST00000121483 273 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm15065-201ENSMUST00000121699 273 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm11414-201ENSMUST00000121795 263 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm26088-201ENSMUST00000157896 131 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm17100-201ENSMUST00000168963 272 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Snord53-201ENSMUST00000175146 78 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.7□□□□□ -1.98
Cbx4O55187 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cbx4O55187 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.7□□□□□ -1.98
Cbx4O55187 Mir3970-201ENSMUST00000199287 90 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm44524-201ENSMUST00000203899 271 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.7□□□□□ -1.98
Cbx4O55187 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm10298-201ENSMUST00000074801 265 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm26107-201ENSMUST00000083972 107 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Gm26327-201ENSMUST00000093724 111 ntBASIC2.7□□□□□ -1.98
Cbx4O55187 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cbx4O55187 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Cbx4O55187 Gm9009-201ENSMUST00000117321 326 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 DQ267100-201ENSMUST00000122600 72 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.69□□□□□ -1.98
Cbx4O55187 Gm22839-201ENSMUST00000158436 304 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Gm24056-201ENSMUST00000158617 146 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Gm24736-201ENSMUST00000158862 130 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Cbx4O55187 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Cbx4O55187 Gm29665-201ENSMUST00000191457 528 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.69□□□□□ -1.98
Cbx4O55187 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.69□□□□□ -1.98
Cbx4O55187 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Cbx4O55187 Gm26458-201ENSMUST00000082832 128 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Gm24817-201ENSMUST00000093672 105 ntBASIC2.69□□□□□ -1.98
Cbx4O55187 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Cbx4O55187 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Cbx4O55187 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Cbx4O55187 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cbx4O55187 Gm24282-201ENSMUST00000104232 66 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Mir669g-201ENSMUST00000116809 123 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm12647-201ENSMUST00000118977 265 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm24385-201ENSMUST00000122694 350 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm23829-201ENSMUST00000157392 270 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm22141-201ENSMUST00000157403 277 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm24879-201ENSMUST00000158386 143 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm23409-201ENSMUST00000158516 237 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm23581-201ENSMUST00000158531 63 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Cbx4O55187 Gm25956-201ENSMUST00000175115 217 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Mir6370-201ENSMUST00000183510 120 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm27786-201ENSMUST00000184337 70 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm5329-201ENSMUST00000186898 463 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm20058-201ENSMUST00000186939 284 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm44655-201ENSMUST00000207768 423 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm8940-201ENSMUST00000212585 219 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.68□□□□□ -1.98
Cbx4O55187 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Cbx4O55187 Gm25896-201ENSMUST00000083713 136 ntBASIC2.68□□□□□ -1.98
Cbx4O55187 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Cbx4O55187 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
Cbx4O55187 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Cbx4O55187 Gm25500-201ENSMUST00000104426 123 ntBASIC2.67□□□□□ -1.98
Cbx4O55187 Gm26156-201ENSMUST00000116999 123 ntBASIC2.67□□□□□ -1.98
Cbx4O55187 Gm13329-201ENSMUST00000117063 265 ntBASIC2.67□□□□□ -1.98
Cbx4O55187 Gm14069-201ENSMUST00000120815 229 ntBASIC2.67□□□□□ -1.98
Cbx4O55187 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cbx4O55187 Gm25373-201ENSMUST00000158156 115 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms