Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm26240-201ENSMUST00000101893 105 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm25526-201ENSMUST00000104332 132 ntBASIC2.64□□□□□ -1.99
Clk3O35492 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Clk3O35492 Gm26088-201ENSMUST00000157896 131 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.64□□□□□ -1.99
Clk3O35492 Gm23268-201ENSMUST00000175494 78 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Mir7578-201ENSMUST00000183455 82 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm29397-201ENSMUST00000185205 333 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm44083-201ENSMUST00000203114 337 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.64□□□□□ -1.99
Clk3O35492 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.64□□□□□ -1.99
Clk3O35492 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.64□□□□□ -1.99
Clk3O35492 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm9370-201ENSMUST00000222787 609 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.64□□□□□ -1.99
Clk3O35492 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Clk3O35492 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Clk3O35492 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.64□□□□□ -1.99
Clk3O35492 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Clk3O35492 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Clk3O35492 Gm24282-201ENSMUST00000104232 66 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm11285-201ENSMUST00000118443 322 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm25945-201ENSMUST00000122484 135 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm22479-201ENSMUST00000122566 81 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm23380-201ENSMUST00000158448 103 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm23476-201ENSMUST00000158881 274 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Snord53-201ENSMUST00000175146 78 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm22242-201ENSMUST00000175224 118 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm20257-202ENSMUST00000188643 130 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm37162-201ENSMUST00000191708 551 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Mir3068-202ENSMUST00000197755 79 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm44459-201ENSMUST00000203926 160 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Clk3O35492 Gm8940-201ENSMUST00000212585 219 ntBASIC2.63□□□□□ -1.99
Clk3O35492 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Gm23453-201ENSMUST00000083326 106 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.63□□□□□ -1.99
Clk3O35492 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.63□□□□□ -1.99
Clk3O35492 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Clk3O35492 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Clk3O35492 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Clk3O35492 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm23202-201ENSMUST00000104376 129 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm24376-201ENSMUST00000104399 127 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Clk3O35492 Gm12837-201ENSMUST00000120131 373 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm14402-201ENSMUST00000122217 508 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm16533-201ENSMUST00000140035 228 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.62□□□□□ -1.99
Clk3O35492 Gm8292-201ENSMUST00000162574 396 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Snord93-201ENSMUST00000175580 71 ntBASIC2.62□□□□□ -1.99
Clk3O35492 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Clk3O35492 Gm43193-201ENSMUST00000197732 441 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm44858-201ENSMUST00000207360 154 ntBASIC2.62□□□□□ -1.99
Clk3O35492 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.62□□□□□ -1.99
Clk3O35492 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.62□□□□□ -1.99
Clk3O35492 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
Clk3O35492 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Clk3O35492 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Clk3O35492 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.62□□□□□ -1.99
Clk3O35492 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Clk3O35492 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Clk3O35492 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm22486-201ENSMUST00000116815 137 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm12513-201ENSMUST00000118617 352 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm14761-201ENSMUST00000121363 262 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm25454-201ENSMUST00000157947 315 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm26215-201ENSMUST00000158584 139 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Clk3O35492 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm9830-201ENSMUST00000178509 357 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Clk3O35492 Gm37338-201ENSMUST00000191986 127 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm42570-201ENSMUST00000195937 292 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm44373-201ENSMUST00000196112 169 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm44337-201ENSMUST00000196553 114 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm43406-201ENSMUST00000200356 334 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Gm44161-201ENSMUST00000203532 253 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.61□□□□□ -1.99
Clk3O35492 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Clk3O35492 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Clk3O35492 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Clk3O35492 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Clk3O35492 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm12785-201ENSMUST00000122052 172 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm24911-201ENSMUST00000157292 136 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm22216-201ENSMUST00000157557 114 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm25653-201ENSMUST00000158473 138 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm17065-201ENSMUST00000165245 239 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm28288-201ENSMUST00000191019 214 ntBASIC2.6□□□□□ -1.99
Clk3O35492 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.6□□□□□ -1.99
Clk3O35492 Gm44419-201ENSMUST00000203338 229 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms